Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09850 and BWI76_RS09855 overlap by 64 nucleotides BWI76_RS09855 and BWI76_RS09860 are separated by 149 nucleotides BWI76_RS09860 and BWI76_RS09865 are separated by 13 nucleotides BWI76_RS09865 and BWI76_RS09870 are separated by 60 nucleotides
BWI76_RS09850: BWI76_RS09850 - L,D-transpeptidase, at 2,069,449 to 2,071,242
_RS09850
BWI76_RS09855: BWI76_RS09855 - hypothetical protein, at 2,071,179 to 2,071,393
_RS09855
BWI76_RS09860: BWI76_RS09860 - hypothetical protein, at 2,071,543 to 2,072,094
_RS09860
BWI76_RS09865: BWI76_RS09865 - MBL fold hydrolase, at 2,072,108 to 2,072,755
_RS09865
BWI76_RS09870: BWI76_RS09870 - aromatic amino acid aminotransferase, at 2,072,816 to 2,074,006
_RS09870
Position (kb)
2071
2072
2073 Strain fitness (log2 ratio)
-2
-1
0
1 at 2070.725 kb on - strand, within BWI76_RS09850 at 2070.731 kb on + strand, within BWI76_RS09850 at 2070.739 kb on - strand, within BWI76_RS09850 at 2070.907 kb on - strand, within BWI76_RS09850 at 2070.953 kb on - strand, within BWI76_RS09850 at 2070.959 kb on - strand, within BWI76_RS09850 at 2071.000 kb on + strand, within BWI76_RS09850 at 2071.003 kb on - strand, within BWI76_RS09850 at 2071.038 kb on - strand, within BWI76_RS09850 at 2071.332 kb on + strand, within BWI76_RS09855 at 2071.433 kb on + strand at 2071.455 kb on + strand at 2071.455 kb on + strand at 2071.478 kb on + strand at 2071.818 kb on + strand, within BWI76_RS09860 at 2071.818 kb on + strand, within BWI76_RS09860 at 2071.826 kb on - strand, within BWI76_RS09860 at 2071.826 kb on - strand, within BWI76_RS09860 at 2072.025 kb on - strand, within BWI76_RS09860 at 2072.244 kb on + strand, within BWI76_RS09865 at 2072.262 kb on - strand, within BWI76_RS09865 at 2072.312 kb on + strand, within BWI76_RS09865 at 2072.317 kb on + strand, within BWI76_RS09865 at 2072.317 kb on + strand, within BWI76_RS09865 at 2072.317 kb on + strand, within BWI76_RS09865 at 2072.325 kb on - strand, within BWI76_RS09865
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X remove 2,070,725 - BWI76_RS09850 0.71 +1.0 2,070,731 + BWI76_RS09850 0.71 -0.1 2,070,739 - BWI76_RS09850 0.72 -0.1 2,070,907 - BWI76_RS09850 0.81 -0.5 2,070,953 - BWI76_RS09850 0.84 -0.3 2,070,959 - BWI76_RS09850 0.84 -0.3 2,071,000 + BWI76_RS09850 0.86 +0.2 2,071,003 - BWI76_RS09850 0.87 +1.2 2,071,038 - BWI76_RS09850 0.89 -0.1 2,071,332 + BWI76_RS09855 0.71 +0.6 2,071,433 + -0.5 2,071,455 + -1.0 2,071,455 + -0.3 2,071,478 + +0.4 2,071,818 + BWI76_RS09860 0.50 -0.6 2,071,818 + BWI76_RS09860 0.50 -0.9 2,071,826 - BWI76_RS09860 0.51 -0.1 2,071,826 - BWI76_RS09860 0.51 -1.1 2,072,025 - BWI76_RS09860 0.87 -2.3 2,072,244 + BWI76_RS09865 0.21 -0.1 2,072,262 - BWI76_RS09865 0.24 +1.3 2,072,312 + BWI76_RS09865 0.31 -1.2 2,072,317 + BWI76_RS09865 0.32 -0.1 2,072,317 + BWI76_RS09865 0.32 -0.8 2,072,317 + BWI76_RS09865 0.32 -0.3 2,072,325 - BWI76_RS09865 0.33 -0.3
Or see this region's nucleotide sequence