Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06235
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 1,307,514 | - | -0.0 | |||
| 1,307,514 | - | +0.2 | |||
| 1,307,530 | + | +0.1 | |||
| 1,307,540 | - | +0.3 | |||
| 1,307,567 | + | -0.6 | |||
| 1,307,575 | - | -0.1 | |||
| 1,307,707 | + | -0.6 | |||
| 1,307,707 | + | -0.1 | |||
| 1,307,707 | + | -0.4 | |||
| 1,307,855 | + | BWI76_RS06230 | 0.16 | +2.1 | |
| 1,307,865 | + | BWI76_RS06230 | 0.18 | -0.2 | |
| 1,307,933 | + | BWI76_RS06230 | 0.28 | -0.4 | |
| 1,308,435 | + | -1.1 | |||
| 1,308,444 | + | -0.2 | |||
| 1,308,454 | + | -0.1 | |||
| 1,308,850 | - | BWI76_RS06235 | 0.31 | +0.0 | |
| 1,309,114 | + | BWI76_RS06235 | 0.51 | +0.4 | |
| 1,309,256 | - | BWI76_RS06235 | 0.62 | +0.1 | |
| 1,309,312 | + | BWI76_RS06235 | 0.67 | -0.1 | |
| 1,309,374 | - | BWI76_RS06235 | 0.71 | +1.6 | |
| 1,309,654 | + | +0.1 | |||
| 1,309,657 | - | -0.3 | |||
| 1,309,699 | + | -0.2 | |||
| 1,309,814 | + | -0.2 | |||
| 1,309,961 | + | -0.2 | |||
| 1,310,003 | - | +0.4 | |||
| 1,310,122 | - | -0.2 | |||
| 1,310,139 | + | -0.6 | |||
| 1,310,203 | + | -0.1 | |||
| 1,310,211 | + | -0.2 | |||
| 1,310,281 | + | +0.4 | |||
| 1,310,281 | + | -1.0 | |||
| 1,310,350 | + | BWI76_RS06240 | 0.14 | +0.0 | |
| 1,310,538 | - | BWI76_RS06240 | 0.28 | +0.5 |
Or see this region's nucleotide sequence