Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06050
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 1,270,102 | - | +0.2 | |||
| 1,270,158 | - | +0.0 | |||
| 1,270,158 | - | -0.1 | |||
| 1,270,560 | + | BWI76_RS06045 | 0.49 | -0.1 | |
| 1,270,568 | - | BWI76_RS06045 | 0.49 | -0.5 | |
| 1,270,625 | - | BWI76_RS06045 | 0.55 | -0.1 | |
| 1,270,721 | - | BWI76_RS06045 | 0.64 | +0.4 | |
| 1,270,736 | - | BWI76_RS06045 | 0.66 | +0.5 | |
| 1,270,892 | - | BWI76_RS06045 | 0.81 | -1.6 | |
| 1,271,579 | + | BWI76_RS06050 | 0.38 | +0.1 | |
| 1,271,579 | - | BWI76_RS06050 | 0.38 | +0.2 | |
| 1,271,608 | - | BWI76_RS06050 | 0.40 | +0.5 | |
| 1,271,804 | + | BWI76_RS06050 | 0.55 | -0.2 | |
| 1,271,951 | - | +0.6 | |||
| 1,271,990 | - | BWI76_RS06050 | 0.69 | +1.1 | |
| 1,272,008 | + | BWI76_RS06050 | 0.71 | -0.1 | |
| 1,272,205 | - | BWI76_RS06050 | 0.86 | +0.8 | |
| 1,272,238 | - | BWI76_RS06050 | 0.88 | +0.8 | |
| 1,272,456 | + | -0.3 | |||
| 1,272,544 | + | +0.1 | |||
| 1,272,563 | + | +0.1 | |||
| 1,272,642 | + | BWI76_RS06055 | 0.11 | +0.1 | |
| 1,272,666 | + | BWI76_RS06055 | 0.12 | -0.1 | |
| 1,272,721 | + | BWI76_RS06055 | 0.16 | -0.7 | |
| 1,273,045 | + | BWI76_RS06055 | 0.37 | +0.1 |
Or see this region's nucleotide sequence