Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26370 and BWI76_RS26375 are separated by 150 nucleotides BWI76_RS26375 and BWI76_RS26380 are separated by 117 nucleotides
BWI76_RS26370: BWI76_RS26370 - aromatic amino acid transporter, at 5,457,882 to 5,459,126
_RS26370
BWI76_RS26375: BWI76_RS26375 - aspartate aminotransferase family protein, at 5,459,277 to 5,460,542
_RS26375
BWI76_RS26380: BWI76_RS26380 - decarboxylase, at 5,460,660 to 5,462,174
_RS26380
Position (kb) 5459
5460
5461 Strain fitness (log2 ratio) -1
0
1
2 at 5458.369 kb on - strand, within BWI76_RS26370 at 5458.415 kb on - strand, within BWI76_RS26370 at 5458.416 kb on - strand, within BWI76_RS26370 at 5458.602 kb on - strand, within BWI76_RS26370 at 5458.614 kb on + strand, within BWI76_RS26370 at 5458.614 kb on + strand, within BWI76_RS26370 at 5458.622 kb on - strand, within BWI76_RS26370 at 5458.680 kb on - strand, within BWI76_RS26370 at 5458.903 kb on + strand, within BWI76_RS26370 at 5458.911 kb on - strand, within BWI76_RS26370 at 5459.069 kb on + strand at 5459.077 kb on - strand at 5459.314 kb on + strand at 5459.385 kb on - strand at 5459.523 kb on + strand, within BWI76_RS26375 at 5459.523 kb on + strand, within BWI76_RS26375 at 5459.531 kb on - strand, within BWI76_RS26375 at 5459.531 kb on - strand, within BWI76_RS26375 at 5459.541 kb on - strand, within BWI76_RS26375 at 5459.650 kb on + strand, within BWI76_RS26375 at 5459.669 kb on - strand, within BWI76_RS26375 at 5459.786 kb on - strand, within BWI76_RS26375 at 5459.788 kb on + strand, within BWI76_RS26375 at 5459.835 kb on + strand, within BWI76_RS26375 at 5460.070 kb on + strand at 5460.104 kb on + strand, within BWI76_RS26375 at 5460.111 kb on + strand, within BWI76_RS26375 at 5460.177 kb on - strand, within BWI76_RS26375 at 5460.338 kb on - strand, within BWI76_RS26375 at 5460.390 kb on - strand, within BWI76_RS26375 at 5460.428 kb on + strand at 5460.451 kb on - strand at 5460.493 kb on - strand at 5460.527 kb on + strand at 5460.766 kb on + strand at 5460.954 kb on + strand, within BWI76_RS26380 at 5461.234 kb on - strand, within BWI76_RS26380 at 5461.245 kb on - strand, within BWI76_RS26380 at 5461.283 kb on - strand, within BWI76_RS26380 at 5461.500 kb on - strand, within BWI76_RS26380
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X remove 5,458,369 - BWI76_RS26370 0.39 -0.1 5,458,415 - BWI76_RS26370 0.43 +0.1 5,458,416 - BWI76_RS26370 0.43 +0.1 5,458,602 - BWI76_RS26370 0.58 +2.1 5,458,614 + BWI76_RS26370 0.59 -0.7 5,458,614 + BWI76_RS26370 0.59 -0.1 5,458,622 - BWI76_RS26370 0.59 -0.5 5,458,680 - BWI76_RS26370 0.64 -0.1 5,458,903 + BWI76_RS26370 0.82 -0.2 5,458,911 - BWI76_RS26370 0.83 -1.4 5,459,069 + +0.0 5,459,077 - +0.4 5,459,314 + +0.4 5,459,385 - -0.2 5,459,523 + BWI76_RS26375 0.19 -0.1 5,459,523 + BWI76_RS26375 0.19 -0.1 5,459,531 - BWI76_RS26375 0.20 -0.8 5,459,531 - BWI76_RS26375 0.20 -0.5 5,459,541 - BWI76_RS26375 0.21 -0.9 5,459,650 + BWI76_RS26375 0.29 -0.2 5,459,669 - BWI76_RS26375 0.31 -0.8 5,459,786 - BWI76_RS26375 0.40 -0.2 5,459,788 + BWI76_RS26375 0.40 +0.1 5,459,835 + BWI76_RS26375 0.44 -0.6 5,460,070 + -0.3 5,460,104 + BWI76_RS26375 0.65 -0.2 5,460,111 + BWI76_RS26375 0.66 +0.1 5,460,177 - BWI76_RS26375 0.71 +0.2 5,460,338 - BWI76_RS26375 0.84 -0.2 5,460,390 - BWI76_RS26375 0.88 -0.1 5,460,428 + -0.1 5,460,451 - -0.7 5,460,493 - -0.2 5,460,527 + +1.0 5,460,766 + +0.1 5,460,954 + BWI76_RS26380 0.19 -0.9 5,461,234 - BWI76_RS26380 0.38 +0.1 5,461,245 - BWI76_RS26380 0.39 +0.5 5,461,283 - BWI76_RS26380 0.41 +0.0 5,461,500 - BWI76_RS26380 0.55 -0.1
Or see this region's nucleotide sequence