Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12355

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS12350 and BWI76_RS12355 are separated by 79 nucleotides BWI76_RS12350: BWI76_RS12350 - kinase, at 2,576,771 to 2,579,849 _RS12350 BWI76_RS12355: BWI76_RS12355 - flagellar biosynthesis protein, at 2,579,929 to 2,580,297 _RS12355 Position (kb) 2579 2580 2581Strain fitness (log2 ratio) -2 -1 0 1at 2579.113 kb on + strand, within BWI76_RS12350at 2579.941 kb on - strandat 2579.944 kb on + strandat 2580.049 kb on - strand, within BWI76_RS12355at 2580.120 kb on + strand, within BWI76_RS12355at 2580.169 kb on - strand, within BWI76_RS12355at 2580.181 kb on + strand, within BWI76_RS12355at 2580.183 kb on - strand, within BWI76_RS12355at 2580.194 kb on - strand, within BWI76_RS12355at 2580.199 kb on - strand, within BWI76_RS12355at 2580.199 kb on - strand, within BWI76_RS12355at 2580.199 kb on - strand, within BWI76_RS12355at 2580.199 kb on - strandat 2580.201 kb on - strand, within BWI76_RS12355at 2580.201 kb on - strand, within BWI76_RS12355at 2580.212 kb on + strand, within BWI76_RS12355at 2580.225 kb on + strand, within BWI76_RS12355at 2580.261 kb on - strandat 2580.376 kb on - strandat 2580.457 kb on - strandat 2580.463 kb on - strandat 2580.465 kb on + strandat 2580.472 kb on + strandat 2580.473 kb on - strandat 2580.522 kb on + strandat 2580.532 kb on - strandat 2580.578 kb on - strandat 2580.610 kb on - strandat 2580.612 kb on + strandat 2580.615 kb on - strandat 2580.644 kb on - strandat 2580.729 kb on + strandat 2580.743 kb on + strandat 2580.801 kb on + strandat 2580.804 kb on - strandat 2580.816 kb on + strandat 2580.817 kb on + strandat 2580.827 kb on + strandat 2580.866 kb on + strandat 2580.874 kb on - strandat 2580.894 kb on + strandat 2580.915 kb on + strandat 2581.103 kb on - strandat 2581.109 kb on + strandat 2581.117 kb on - strandat 2581.117 kb on - strandat 2581.142 kb on + strandat 2581.198 kb on + strandat 2581.230 kb on + strandat 2581.262 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
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2,579,113 + BWI76_RS12350 0.76 -0.9
2,579,941 - -0.5
2,579,944 + -1.6
2,580,049 - BWI76_RS12355 0.33 -0.5
2,580,120 + BWI76_RS12355 0.52 -1.3
2,580,169 - BWI76_RS12355 0.65 -0.7
2,580,181 + BWI76_RS12355 0.68 -0.8
2,580,183 - BWI76_RS12355 0.69 -1.2
2,580,194 - BWI76_RS12355 0.72 -0.7
2,580,199 - BWI76_RS12355 0.73 -0.7
2,580,199 - BWI76_RS12355 0.73 -0.9
2,580,199 - BWI76_RS12355 0.73 -0.4
2,580,199 - -1.0
2,580,201 - BWI76_RS12355 0.74 -0.7
2,580,201 - BWI76_RS12355 0.74 -0.9
2,580,212 + BWI76_RS12355 0.77 -1.0
2,580,225 + BWI76_RS12355 0.80 +0.5
2,580,261 - -1.7
2,580,376 - +0.0
2,580,457 - -2.4
2,580,463 - -0.6
2,580,465 + -0.4
2,580,472 + -0.4
2,580,473 - -1.0
2,580,522 + -1.6
2,580,532 - -0.8
2,580,578 - -0.2
2,580,610 - -1.0
2,580,612 + -2.3
2,580,615 - -0.9
2,580,644 - +0.5
2,580,729 + -0.3
2,580,743 + -0.7
2,580,801 + -1.1
2,580,804 - -0.5
2,580,816 + -0.2
2,580,817 + +0.1
2,580,827 + -2.0
2,580,866 + -0.6
2,580,874 - -1.7
2,580,894 + -0.2
2,580,915 + -0.7
2,581,103 - +0.2
2,581,109 + -2.0
2,581,117 - -0.3
2,581,117 - -1.9
2,581,142 + -1.4
2,581,198 + -0.4
2,581,230 + -1.0
2,581,262 - -0.9

Or see this region's nucleotide sequence