Experiment: R2A with Vogels_fungal_media 0.8X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23150 and BWI76_RS23155 overlap by 4 nucleotides BWI76_RS23155 and BWI76_RS23160 are separated by 3 nucleotides BWI76_RS23160 and BWI76_RS23165 are separated by 9 nucleotides BWI76_RS23165 and BWI76_RS23170 overlap by 4 nucleotides
BWI76_RS23150: BWI76_RS23150 - propanediol utilization phosphotransacylase, at 4,824,550 to 4,825,182
_RS23150
BWI76_RS23155: BWI76_RS23155 - microcompartment protein PduM, at 4,825,179 to 4,825,670
_RS23155
BWI76_RS23160: BWI76_RS23160 - ethanolamine utilization protein EutN, at 4,825,674 to 4,825,949
_RS23160
BWI76_RS23165: BWI76_RS23165 - ATP:cob(I)alamin adenosyltransferase, at 4,825,959 to 4,826,969
_RS23165
BWI76_RS23170: BWI76_RS23170 - aldehyde dehydrogenase EutE, at 4,826,966 to 4,828,357
_RS23170
Position (kb) 4825
4826
4827 Strain fitness (log2 ratio) -1
0
1
2 at 4825.221 kb on - strand at 4825.274 kb on + strand, within BWI76_RS23155 at 4825.417 kb on - strand, within BWI76_RS23155 at 4825.496 kb on - strand, within BWI76_RS23155 at 4825.572 kb on + strand, within BWI76_RS23155 at 4825.612 kb on + strand, within BWI76_RS23155 at 4825.973 kb on - strand at 4826.213 kb on + strand, within BWI76_RS23165 at 4826.266 kb on + strand, within BWI76_RS23165 at 4826.442 kb on + strand, within BWI76_RS23165 at 4826.457 kb on + strand, within BWI76_RS23165 at 4826.550 kb on + strand, within BWI76_RS23165 at 4826.580 kb on - strand, within BWI76_RS23165 at 4826.996 kb on - strand at 4827.014 kb on + strand at 4827.104 kb on + strand at 4827.265 kb on + strand, within BWI76_RS23170 at 4827.389 kb on - strand, within BWI76_RS23170 at 4827.415 kb on - strand, within BWI76_RS23170 at 4827.474 kb on + strand, within BWI76_RS23170 at 4827.482 kb on - strand, within BWI76_RS23170 at 4827.688 kb on + strand, within BWI76_RS23170
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Vogels_fungal_media 0.8X remove 4,825,221 - +0.2 4,825,274 + BWI76_RS23155 0.19 +0.3 4,825,417 - BWI76_RS23155 0.48 +0.1 4,825,496 - BWI76_RS23155 0.64 -0.2 4,825,572 + BWI76_RS23155 0.80 +0.1 4,825,612 + BWI76_RS23155 0.88 +0.3 4,825,973 - +2.2 4,826,213 + BWI76_RS23165 0.25 -0.2 4,826,266 + BWI76_RS23165 0.30 +0.0 4,826,442 + BWI76_RS23165 0.48 +0.0 4,826,457 + BWI76_RS23165 0.49 +1.9 4,826,550 + BWI76_RS23165 0.58 +2.1 4,826,580 - BWI76_RS23165 0.61 -0.1 4,826,996 - -0.1 4,827,014 + +0.6 4,827,104 + -0.3 4,827,265 + BWI76_RS23170 0.21 -0.8 4,827,389 - BWI76_RS23170 0.30 +0.0 4,827,415 - BWI76_RS23170 0.32 +0.3 4,827,474 + BWI76_RS23170 0.36 +0.7 4,827,482 - BWI76_RS23170 0.37 +0.5 4,827,688 + BWI76_RS23170 0.52 +0.7
Or see this region's nucleotide sequence