Experiment: R2A with Vogels_fungal_media 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22510 and BWI76_RS22515 are separated by 16 nucleotides BWI76_RS22515 and BWI76_RS22520 overlap by 4 nucleotides BWI76_RS22520 and BWI76_RS22525 overlap by 14 nucleotides
BWI76_RS22510: BWI76_RS22510 - hypothetical protein, at 4,692,408 to 4,692,659
_RS22510
BWI76_RS22515: BWI76_RS22515 - acyl dehydratase, at 4,692,676 to 4,693,482
_RS22515
BWI76_RS22520: BWI76_RS22520 - 3-oxoacyl-ACP synthase, at 4,693,479 to 4,694,732
_RS22520
BWI76_RS22525: BWI76_RS22525 - cation efflux system protein, at 4,694,719 to 4,696,116
_RS22525
Position (kb) 4693
4694
4695 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4692.950 kb on - strand, within BWI76_RS22515 at 4693.031 kb on - strand, within BWI76_RS22515 at 4693.172 kb on - strand, within BWI76_RS22515 at 4693.292 kb on - strand, within BWI76_RS22515 at 4693.462 kb on + strand at 4693.462 kb on + strand at 4693.554 kb on - strand at 4693.609 kb on - strand, within BWI76_RS22520 at 4693.609 kb on - strand, within BWI76_RS22520 at 4693.645 kb on + strand, within BWI76_RS22520 at 4693.685 kb on - strand, within BWI76_RS22520 at 4693.712 kb on - strand, within BWI76_RS22520 at 4694.002 kb on - strand, within BWI76_RS22520 at 4694.115 kb on + strand, within BWI76_RS22520 at 4694.384 kb on - strand, within BWI76_RS22520 at 4694.547 kb on - strand, within BWI76_RS22520 at 4694.830 kb on - strand at 4694.860 kb on + strand, within BWI76_RS22525 at 4695.064 kb on + strand, within BWI76_RS22525 at 4695.072 kb on - strand, within BWI76_RS22525 at 4695.077 kb on - strand, within BWI76_RS22525 at 4695.087 kb on - strand, within BWI76_RS22525 at 4695.087 kb on - strand, within BWI76_RS22525 at 4695.087 kb on - strand, within BWI76_RS22525 at 4695.352 kb on + strand, within BWI76_RS22525 at 4695.426 kb on + strand, within BWI76_RS22525 at 4695.610 kb on - strand, within BWI76_RS22525 at 4695.655 kb on - strand, within BWI76_RS22525
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Vogels_fungal_media 0.2X remove 4,692,950 - BWI76_RS22515 0.34 -0.3 4,693,031 - BWI76_RS22515 0.44 +0.4 4,693,172 - BWI76_RS22515 0.61 +0.5 4,693,292 - BWI76_RS22515 0.76 -0.8 4,693,462 + -0.5 4,693,462 + -0.5 4,693,554 - +1.1 4,693,609 - BWI76_RS22520 0.10 -3.1 4,693,609 - BWI76_RS22520 0.10 -0.5 4,693,645 + BWI76_RS22520 0.13 -0.3 4,693,685 - BWI76_RS22520 0.16 -1.0 4,693,712 - BWI76_RS22520 0.19 -0.2 4,694,002 - BWI76_RS22520 0.42 +0.1 4,694,115 + BWI76_RS22520 0.51 -2.1 4,694,384 - BWI76_RS22520 0.72 -2.3 4,694,547 - BWI76_RS22520 0.85 -1.6 4,694,830 - -3.2 4,694,860 + BWI76_RS22525 0.10 +0.2 4,695,064 + BWI76_RS22525 0.25 +0.4 4,695,072 - BWI76_RS22525 0.25 -0.4 4,695,077 - BWI76_RS22525 0.26 +1.3 4,695,087 - BWI76_RS22525 0.26 -0.2 4,695,087 - BWI76_RS22525 0.26 +0.0 4,695,087 - BWI76_RS22525 0.26 -0.4 4,695,352 + BWI76_RS22525 0.45 -0.3 4,695,426 + BWI76_RS22525 0.51 -0.1 4,695,610 - BWI76_RS22525 0.64 +1.0 4,695,655 - BWI76_RS22525 0.67 +0.5
Or see this region's nucleotide sequence