Experiment: R2A with Vogels_fungal_media 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14955 and BWI76_RS14960 are separated by 217 nucleotides BWI76_RS14960 and BWI76_RS14965 are separated by 108 nucleotides
BWI76_RS14955: BWI76_RS14955 - peptidase M17 leucyl aminopeptidase domain-containing protein, at 3,134,239 to 3,135,594
_RS14955
BWI76_RS14960: BWI76_RS14960 - MFS transporter, at 3,135,812 to 3,137,011
_RS14960
BWI76_RS14965: BWI76_RS14965 - AraC family transcriptional regulator, at 3,137,120 to 3,138,076
_RS14965
Position (kb)
3135
3136
3137
3138 Strain fitness (log2 ratio)
-1
0
1 at 3135.083 kb on + strand, within BWI76_RS14955 at 3135.123 kb on + strand, within BWI76_RS14955 at 3135.314 kb on + strand, within BWI76_RS14955 at 3135.319 kb on + strand, within BWI76_RS14955 at 3135.346 kb on + strand, within BWI76_RS14955 at 3135.393 kb on + strand, within BWI76_RS14955 at 3135.632 kb on - strand at 3135.733 kb on - strand at 3136.243 kb on + strand, within BWI76_RS14960 at 3136.251 kb on - strand, within BWI76_RS14960 at 3136.251 kb on - strand, within BWI76_RS14960 at 3136.289 kb on - strand, within BWI76_RS14960 at 3136.381 kb on - strand, within BWI76_RS14960 at 3136.427 kb on + strand, within BWI76_RS14960 at 3136.434 kb on + strand, within BWI76_RS14960 at 3136.792 kb on + strand, within BWI76_RS14960 at 3136.844 kb on + strand, within BWI76_RS14960 at 3136.928 kb on - strand at 3137.141 kb on - strand at 3137.265 kb on + strand, within BWI76_RS14965 at 3137.467 kb on + strand, within BWI76_RS14965 at 3137.507 kb on - strand, within BWI76_RS14965 at 3137.932 kb on - strand, within BWI76_RS14965 at 3137.985 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Vogels_fungal_media 0.2X remove 3,135,083 + BWI76_RS14955 0.62 +0.1 3,135,123 + BWI76_RS14955 0.65 +0.6 3,135,314 + BWI76_RS14955 0.79 +0.6 3,135,319 + BWI76_RS14955 0.80 -0.1 3,135,346 + BWI76_RS14955 0.82 -0.5 3,135,393 + BWI76_RS14955 0.85 -0.6 3,135,632 - -0.4 3,135,733 - +0.8 3,136,243 + BWI76_RS14960 0.36 +1.0 3,136,251 - BWI76_RS14960 0.37 -0.2 3,136,251 - BWI76_RS14960 0.37 +0.1 3,136,289 - BWI76_RS14960 0.40 +0.5 3,136,381 - BWI76_RS14960 0.47 +1.2 3,136,427 + BWI76_RS14960 0.51 +0.0 3,136,434 + BWI76_RS14960 0.52 +1.0 3,136,792 + BWI76_RS14960 0.82 +0.4 3,136,844 + BWI76_RS14960 0.86 +0.2 3,136,928 - -0.1 3,137,141 - -0.3 3,137,265 + BWI76_RS14965 0.15 -0.2 3,137,467 + BWI76_RS14965 0.36 +0.2 3,137,507 - BWI76_RS14965 0.40 -0.2 3,137,932 - BWI76_RS14965 0.85 -0.1 3,137,985 - -0.6
Or see this region's nucleotide sequence