Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26070 and BWI76_RS26075 are separated by 17 nucleotides BWI76_RS26075 and BWI76_RS26080 are separated by 78 nucleotides BWI76_RS26080 and BWI76_RS26085 are separated by 84 nucleotides
BWI76_RS26070: BWI76_RS26070 - ribulose-phosphate 3-epimerase, at 5,387,179 to 5,387,856
_RS26070
BWI76_RS26075: BWI76_RS26075 - DNA adenine methylase, at 5,387,874 to 5,388,701
_RS26075
BWI76_RS26080: BWI76_RS26080 - cell division protein DamX, at 5,388,780 to 5,390,093
_RS26080
BWI76_RS26085: BWI76_RS26085 - 3-dehydroquinate synthase, at 5,390,178 to 5,391,272
_RS26085
Position (kb) 5388
5389
5390
5391 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 5387.903 kb on - strand at 5388.260 kb on + strand, within BWI76_RS26075 at 5388.314 kb on - strand, within BWI76_RS26075 at 5388.314 kb on - strand, within BWI76_RS26075 at 5388.432 kb on - strand, within BWI76_RS26075 at 5388.454 kb on + strand, within BWI76_RS26075 at 5388.513 kb on + strand, within BWI76_RS26075 at 5388.557 kb on - strand, within BWI76_RS26075 at 5388.805 kb on - strand at 5388.873 kb on - strand at 5388.908 kb on - strand at 5388.910 kb on + strand at 5388.910 kb on + strand at 5388.944 kb on - strand, within BWI76_RS26080 at 5388.997 kb on - strand, within BWI76_RS26080 at 5389.031 kb on - strand, within BWI76_RS26080 at 5389.035 kb on - strand, within BWI76_RS26080 at 5389.045 kb on - strand, within BWI76_RS26080 at 5389.045 kb on - strand, within BWI76_RS26080 at 5389.503 kb on + strand, within BWI76_RS26080 at 5389.535 kb on - strand, within BWI76_RS26080 at 5389.670 kb on + strand, within BWI76_RS26080 at 5389.675 kb on + strand, within BWI76_RS26080 at 5390.224 kb on - strand at 5390.276 kb on - strand at 5390.276 kb on - strand at 5390.737 kb on - strand, within BWI76_RS26085 at 5391.051 kb on - strand, within BWI76_RS26085
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X remove 5,387,903 - -1.7 5,388,260 + BWI76_RS26075 0.47 -2.1 5,388,314 - BWI76_RS26075 0.53 -2.5 5,388,314 - BWI76_RS26075 0.53 -4.7 5,388,432 - BWI76_RS26075 0.67 -2.0 5,388,454 + BWI76_RS26075 0.70 -1.2 5,388,513 + BWI76_RS26075 0.77 -2.8 5,388,557 - BWI76_RS26075 0.82 -1.8 5,388,805 - -0.7 5,388,873 - -0.6 5,388,908 - -1.1 5,388,910 + -2.7 5,388,910 + -3.9 5,388,944 - BWI76_RS26080 0.12 -0.5 5,388,997 - BWI76_RS26080 0.17 -0.6 5,389,031 - BWI76_RS26080 0.19 -0.8 5,389,035 - BWI76_RS26080 0.19 -1.0 5,389,045 - BWI76_RS26080 0.20 -0.2 5,389,045 - BWI76_RS26080 0.20 -1.9 5,389,503 + BWI76_RS26080 0.55 -3.6 5,389,535 - BWI76_RS26080 0.57 -2.5 5,389,670 + BWI76_RS26080 0.68 -3.4 5,389,675 + BWI76_RS26080 0.68 -2.8 5,390,224 - +0.0 5,390,276 - -1.8 5,390,276 - +1.0 5,390,737 - BWI76_RS26085 0.51 +1.0 5,391,051 - BWI76_RS26085 0.80 -1.5
Or see this region's nucleotide sequence