Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23485

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
4,898,501	+		BWI76_RS23475	0.85	-0.7
4,898,501	+		BWI76_RS23475	0.85	-0.6
4,898,501	+		BWI76_RS23475	0.85	-5.8
4,898,501	+		BWI76_RS23475	0.85	+0.2
4,898,501	+		BWI76_RS23475	0.85	-1.2
4,898,502	-		BWI76_RS23475	0.85	-0.7
4,898,502	-		BWI76_RS23475	0.85	-1.1
4,898,502	-		BWI76_RS23475	0.85	-1.1
4,898,502	-		BWI76_RS23475	0.85	-1.5
4,898,502	-		BWI76_RS23475	0.85	-2.7
4,898,502	-		BWI76_RS23475	0.85	-0.1
4,898,502	-		BWI76_RS23475	0.85	-1.2
4,898,502	-		BWI76_RS23475	0.85	-2.3
4,898,502	-		BWI76_RS23475	0.85	+0.9
4,898,509	-		BWI76_RS23475	0.87	-2.6
4,898,509	-		BWI76_RS23475	0.87	-2.0
4,898,509	-		BWI76_RS23475	0.87	-0.9
4,898,509	-		BWI76_RS23475	0.87	-0.6
4,898,580	-				-1.1
4,898,661	+				-0.4
4,898,681	-				-1.3
4,898,689	+				-2.1
4,898,689	+				+0.4
4,898,697	-				-1.4
4,898,697	-				-2.6
4,898,699	-				+0.9
4,898,765	+				+0.9
4,898,816	-		BWI76_RS23480	0.13	-3.2
4,898,818	-		BWI76_RS23480	0.13	-1.8
4,898,823	+		BWI76_RS23480	0.14	-2.4
4,898,829	-		BWI76_RS23480	0.15	-0.4
4,898,831	-		BWI76_RS23480	0.15	-2.0
4,898,832	-				+0.9
4,898,833	+		BWI76_RS23480	0.15	-2.8
4,898,833	+		BWI76_RS23480	0.15	-1.0
4,898,841	-		BWI76_RS23480	0.16	-1.0
4,898,850	-		BWI76_RS23480	0.18	-1.8
4,898,850	-		BWI76_RS23480	0.18	-0.1
4,898,860	-		BWI76_RS23480	0.19	-1.6
4,898,863	-				+2.4
4,898,932	-		BWI76_RS23480	0.29	-2.0
4,898,988	-		BWI76_RS23480	0.37	-0.8
4,898,995	+		BWI76_RS23480	0.38	-2.7
4,898,995	+		BWI76_RS23480	0.38	-2.7
4,899,003	-		BWI76_RS23480	0.39	-1.5
4,899,003	-		BWI76_RS23480	0.39	-2.1
4,899,003	-		BWI76_RS23480	0.39	-0.1
4,899,009	+		BWI76_RS23480	0.40	-1.1
4,899,010	-		BWI76_RS23480	0.40	-0.4
4,899,033	-		BWI76_RS23480	0.43	-3.2
4,899,034	-		BWI76_RS23480	0.43	-2.6
4,899,034	-		BWI76_RS23480	0.43	+0.1
4,899,047	+		BWI76_RS23480	0.45	-1.3
4,899,069	-		BWI76_RS23480	0.48	-0.1
4,899,111	+		BWI76_RS23480	0.54	-2.0
4,899,111	+		BWI76_RS23480	0.54	-2.2
4,899,123	+		BWI76_RS23480	0.56	-0.6
4,899,125	+		BWI76_RS23480	0.56	-2.8
4,899,130	+		BWI76_RS23480	0.57	-2.6
4,899,130	+		BWI76_RS23480	0.57	-3.8
4,899,130	+		BWI76_RS23480	0.57	-1.4
4,899,130	+		BWI76_RS23480	0.57	-1.8
4,899,131	-		BWI76_RS23480	0.57	-0.9
4,899,137	+		BWI76_RS23480	0.58	-1.6
4,899,138	-		BWI76_RS23480	0.58	-1.9
4,899,142	+		BWI76_RS23480	0.58	-1.6
4,899,145	-		BWI76_RS23480	0.59	-1.4
4,899,150	-		BWI76_RS23480	0.59	+0.9
4,899,150	-		BWI76_RS23480	0.59	-0.3
4,899,278	+		BWI76_RS23480	0.77	-3.1
4,899,278	+		BWI76_RS23480	0.77	-2.5
4,899,283	+		BWI76_RS23480	0.78	-2.7
4,899,283	+		BWI76_RS23480	0.78	-0.5
4,899,284	-		BWI76_RS23480	0.78	-2.2
4,899,291	-		BWI76_RS23480	0.79	-1.2
4,899,299	+		BWI76_RS23480	0.80	-1.8
4,899,310	-		BWI76_RS23480	0.82	-0.4
4,899,336	+		BWI76_RS23480	0.85	-1.7
4,899,339	+		BWI76_RS23480	0.86	-0.6
4,899,339	+		BWI76_RS23480	0.86	-2.8
4,899,339	+		BWI76_RS23480	0.86	-2.4
4,899,347	-		BWI76_RS23480	0.87	-0.9
4,899,347	-		BWI76_RS23480	0.87	-4.4
4,899,347	-		BWI76_RS23480	0.87	-0.6
4,899,348	+		BWI76_RS23480	0.87	-1.8
4,899,350	+		BWI76_RS23480	0.87	+0.9
4,899,350	+		BWI76_RS23480	0.87	-2.0
4,899,356	-		BWI76_RS23480	0.88	-2.8
4,899,357	-		BWI76_RS23480	0.88	-1.4
4,899,358	-		BWI76_RS23480	0.88	-1.5
4,899,358	-		BWI76_RS23480	0.88	-0.8
4,899,371	-				+0.4
4,899,375	+				-3.4
4,899,388	+				-0.6
4,899,394	-				-1.7
4,899,394	-				+1.4
4,899,398	+				-1.9
4,899,399	-				-2.7
4,899,403	+				+2.7
4,899,403	+				-3.5
4,899,403	+				-0.6
4,899,406	+				-0.9
4,899,408	+				-1.7
4,899,411	-				-1.5
4,899,411	-				+2.4
4,899,416	+				-0.1
4,899,416	+				-3.0
4,899,416	+				-1.9
4,899,416	+				-1.2
4,899,416	+				-2.4
4,899,416	+				-1.9
4,899,416	+				-2.4
4,899,416	+				-3.0
4,899,424	-				-2.2
4,899,424	-				-4.1
4,899,424	-				-0.7
4,899,474	+				-1.9
4,899,486	+				-1.7
4,899,494	-				-1.4
4,899,494	-				-1.0
4,899,494	-				-2.1
4,899,496	-				-0.6
4,899,502	-				-2.0
4,899,512	+				-0.1
4,899,520	-				-1.7
4,899,531	+				-1.9
4,899,531	+				-0.4
4,899,531	+				-2.0
4,899,531	+				-1.1
4,899,531	+				-1.2
4,899,531	+				-1.4
4,899,536	+				-1.6
4,899,539	-				-2.3
4,899,539	-				-3.7
4,899,539	-				-2.6
4,899,539	-				-1.6
4,899,539	-				-1.8
4,899,539	-				-1.3
4,899,539	-				-1.8
4,899,565	+		BWI76_RS23485	0.10	+0.0
4,899,565	+		BWI76_RS23485	0.10	-1.6
4,899,565	+		BWI76_RS23485	0.10	-2.0
4,899,565	+		BWI76_RS23485	0.10	-1.4
4,899,566	+		BWI76_RS23485	0.10	-1.7
4,899,566	+		BWI76_RS23485	0.10	-0.5
4,899,573	-		BWI76_RS23485	0.12	-1.0
4,899,573	-		BWI76_RS23485	0.12	-2.3
4,899,573	-		BWI76_RS23485	0.12	-2.7
4,899,573	-		BWI76_RS23485	0.12	-1.4
4,899,573	-		BWI76_RS23485	0.12	-1.9
4,899,573	-		BWI76_RS23485	0.12	-1.2
4,899,573	-		BWI76_RS23485	0.12	-2.4
4,899,573	-		BWI76_RS23485	0.12	-1.1
4,899,608	-		BWI76_RS23485	0.17	-2.9
4,899,613	+		BWI76_RS23485	0.18	+0.2
4,899,638	+		BWI76_RS23485	0.22	-0.6
4,899,641	-		BWI76_RS23485	0.22	-1.9
4,899,675	-		BWI76_RS23485	0.27	-2.0
4,899,747	-		BWI76_RS23485	0.38	-1.5
4,899,766	-		BWI76_RS23485	0.41	-2.2
4,899,796	-		BWI76_RS23485	0.46	-1.8
4,899,806	-		BWI76_RS23485	0.47	-2.2
4,900,024	+		BWI76_RS23485	0.81	-0.8
4,900,092	+				-1.6
4,900,095	-				-1.4
4,900,095	-				-1.3
4,900,095	-				-3.5
4,900,133	+				+0.1
4,900,185	-				-1.6
4,900,194	+				+1.2
4,900,217	-				-0.9
4,900,255	+				+0.9
4,900,278	-		BWI76_RS23490	0.12	-2.2
4,900,339	+		BWI76_RS23490	0.18	-0.0
4,900,405	+		BWI76_RS23490	0.24	+0.2
4,900,405	+		BWI76_RS23490	0.24	+0.3
4,900,405	+		BWI76_RS23490	0.24	-0.9
4,900,405	+		BWI76_RS23490	0.24	+0.2
4,900,405	+		BWI76_RS23490	0.24	+0.1
4,900,413	-		BWI76_RS23490	0.25	-0.1
4,900,413	-		BWI76_RS23490	0.25	-0.7
4,900,413	-		BWI76_RS23490	0.25	-0.7
4,900,413	-		BWI76_RS23490	0.25	-0.7
4,900,413	-		BWI76_RS23490	0.25	+1.4
4,900,465	+		BWI76_RS23490	0.30	+0.0
4,900,484	-		BWI76_RS23490	0.32	-0.3
4,900,588	+		BWI76_RS23490	0.43	-0.6
4,900,894	-		BWI76_RS23490	0.73	+0.5
4,901,047	-		BWI76_RS23490	0.89	+0.0
4,901,056	+		BWI76_RS23490	0.90	+0.3
4,901,085	+				+0.9
4,901,124	-				-0.3