Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19920
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
4,167,377 | - | -0.8 | |||
4,167,412 | - | -1.6 | |||
4,167,574 | + | -0.7 | |||
4,167,595 | - | -1.0 | |||
4,167,654 | + | -1.8 | |||
4,168,101 | - | BWI76_RS19915 | 0.74 | -0.5 | |
4,168,214 | + | -2.5 | |||
4,168,313 | + | -0.2 | |||
4,168,504 | - | -0.7 | |||
4,168,804 | + | BWI76_RS19920 | 0.17 | -2.1 | |
4,168,890 | + | BWI76_RS19920 | 0.20 | -2.5 | |
4,168,993 | + | BWI76_RS19920 | 0.24 | -1.5 | |
4,169,341 | + | BWI76_RS19920 | 0.36 | -1.2 | |
4,169,349 | - | BWI76_RS19920 | 0.36 | -0.8 | |
4,169,471 | - | BWI76_RS19920 | 0.41 | -1.1 | |
4,169,550 | + | BWI76_RS19920 | 0.43 | -0.4 | |
4,169,624 | + | BWI76_RS19920 | 0.46 | -0.2 | |
4,169,645 | - | BWI76_RS19920 | 0.47 | -2.2 | |
4,169,663 | - | BWI76_RS19920 | 0.47 | -0.9 | |
4,169,778 | - | BWI76_RS19920 | 0.51 | -1.2 | |
4,169,893 | + | BWI76_RS19920 | 0.55 | -1.6 | |
4,170,277 | - | BWI76_RS19920 | 0.69 | -1.2 | |
4,170,510 | - | -1.5 | |||
4,170,851 | - | BWI76_RS19920 | 0.89 | -3.4 | |
4,171,004 | - | -1.4 | |||
4,171,198 | - | +2.5 | |||
4,171,200 | + | -1.6 | |||
4,171,260 | + | -1.3 | |||
4,171,268 | - | +0.2 |
Or see this region's nucleotide sequence