Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17560
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
3,644,314 | + | BWI76_RS17555 | 0.44 | -0.5 | |
3,644,314 | + | BWI76_RS17555 | 0.44 | -0.5 | |
3,644,324 | + | BWI76_RS17555 | 0.45 | -0.5 | |
3,644,332 | - | BWI76_RS17555 | 0.45 | -2.3 | |
3,644,332 | - | BWI76_RS17555 | 0.45 | +0.4 | |
3,644,339 | + | BWI76_RS17555 | 0.46 | -0.1 | |
3,644,659 | + | BWI76_RS17555 | 0.67 | +0.0 | |
3,644,792 | + | BWI76_RS17555 | 0.76 | +0.5 | |
3,644,826 | + | BWI76_RS17555 | 0.79 | +1.7 | |
3,644,852 | + | BWI76_RS17555 | 0.81 | -0.4 | |
3,645,060 | + | +0.5 | |||
3,645,132 | - | -0.1 | |||
3,645,251 | + | +0.9 | |||
3,645,659 | - | BWI76_RS17560 | 0.18 | +0.2 | |
3,645,950 | - | BWI76_RS17560 | 0.31 | -0.1 | |
3,646,378 | + | BWI76_RS17560 | 0.51 | +0.8 | |
3,646,378 | + | BWI76_RS17560 | 0.51 | -0.1 | |
3,646,388 | + | BWI76_RS17560 | 0.52 | +0.8 | |
3,646,633 | + | BWI76_RS17560 | 0.63 | +0.6 | |
3,647,106 | + | BWI76_RS17560 | 0.85 | +0.6 | |
3,647,446 | + | +0.4 | |||
3,647,446 | + | +0.3 | |||
3,647,446 | + | +0.1 | |||
3,647,446 | + | -0.1 | |||
3,647,447 | - | +0.7 | |||
3,647,571 | - | BWI76_RS17565 | 0.14 | +0.2 | |
3,647,834 | + | BWI76_RS17565 | 0.57 | -0.2 | |
3,648,411 | - | BWI76_RS17570 | 0.55 | -0.9 |
Or see this region's nucleotide sequence