Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10640 and BWI76_RS10645 are separated by 251 nucleotides BWI76_RS10645 and BWI76_RS10650 are separated by 125 nucleotides BWI76_RS10650 and BWI76_RS10655 are separated by 15 nucleotides
BWI76_RS10640: BWI76_RS10640 - AraC family transcriptional regulator, at 2,246,887 to 2,247,720
_RS10640
BWI76_RS10645: BWI76_RS10645 - phytanoyl-CoA dioxygenase, at 2,247,972 to 2,248,739
_RS10645
BWI76_RS10650: BWI76_RS10650 - PTS fructose-like transporter subunit EIIB, at 2,248,865 to 2,249,206
_RS10650
BWI76_RS10655: BWI76_RS10655 - [formate-C-acetyltransferase]-activating enzyme, at 2,249,222 to 2,250,097
_RS10655
Position (kb)
2247
2248
2249 Strain fitness (log2 ratio)
-1
0
1 at 2246.992 kb on + strand, within BWI76_RS10640 at 2247.121 kb on + strand, within BWI76_RS10640 at 2247.148 kb on - strand, within BWI76_RS10640 at 2247.575 kb on - strand, within BWI76_RS10640 at 2247.644 kb on + strand at 2247.729 kb on + strand at 2247.737 kb on - strand at 2247.922 kb on + strand at 2248.058 kb on + strand, within BWI76_RS10645 at 2248.058 kb on + strand, within BWI76_RS10645 at 2248.058 kb on + strand, within BWI76_RS10645 at 2248.071 kb on - strand, within BWI76_RS10645 at 2248.354 kb on + strand, within BWI76_RS10645 at 2248.411 kb on + strand, within BWI76_RS10645 at 2248.419 kb on - strand, within BWI76_RS10645 at 2248.419 kb on - strand, within BWI76_RS10645 at 2248.488 kb on + strand, within BWI76_RS10645 at 2249.028 kb on + strand, within BWI76_RS10650 at 2249.048 kb on - strand, within BWI76_RS10650 at 2249.148 kb on + strand, within BWI76_RS10650 at 2249.150 kb on + strand, within BWI76_RS10650 at 2249.156 kb on - strand, within BWI76_RS10650 at 2249.156 kb on - strand, within BWI76_RS10650 at 2249.389 kb on + strand, within BWI76_RS10655 at 2249.389 kb on + strand, within BWI76_RS10655 at 2249.389 kb on + strand, within BWI76_RS10655 at 2249.397 kb on - strand, within BWI76_RS10655 at 2249.397 kb on - strand, within BWI76_RS10655
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X remove 2,246,992 + BWI76_RS10640 0.13 -0.3 2,247,121 + BWI76_RS10640 0.28 +0.1 2,247,148 - BWI76_RS10640 0.31 -0.3 2,247,575 - BWI76_RS10640 0.82 -0.2 2,247,644 + +0.5 2,247,729 + -1.1 2,247,737 - +0.3 2,247,922 + -0.0 2,248,058 + BWI76_RS10645 0.11 -0.2 2,248,058 + BWI76_RS10645 0.11 +1.1 2,248,058 + BWI76_RS10645 0.11 +0.5 2,248,071 - BWI76_RS10645 0.13 +0.2 2,248,354 + BWI76_RS10645 0.50 +0.9 2,248,411 + BWI76_RS10645 0.57 +1.0 2,248,419 - BWI76_RS10645 0.58 -0.2 2,248,419 - BWI76_RS10645 0.58 +0.1 2,248,488 + BWI76_RS10645 0.67 +0.2 2,249,028 + BWI76_RS10650 0.48 -0.1 2,249,048 - BWI76_RS10650 0.54 +0.2 2,249,148 + BWI76_RS10650 0.83 -0.2 2,249,150 + BWI76_RS10650 0.83 -1.3 2,249,156 - BWI76_RS10650 0.85 +0.5 2,249,156 - BWI76_RS10650 0.85 -1.0 2,249,389 + BWI76_RS10655 0.19 -0.7 2,249,389 + BWI76_RS10655 0.19 +0.0 2,249,389 + BWI76_RS10655 0.19 -0.2 2,249,397 - BWI76_RS10655 0.20 -0.2 2,249,397 - BWI76_RS10655 0.20 +0.0
Or see this region's nucleotide sequence