Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09755
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
---|---|---|---|---|---|
remove | |||||
2,045,259 | - | +0.2 | |||
2,045,259 | - | +0.2 | |||
2,045,337 | + | +0.0 | |||
2,045,347 | + | BWI76_RS09750 | 0.10 | -0.2 | |
2,045,354 | + | BWI76_RS09750 | 0.11 | +1.0 | |
2,045,361 | - | BWI76_RS09750 | 0.12 | +0.4 | |
2,045,433 | - | BWI76_RS09750 | 0.23 | -0.1 | |
2,045,490 | + | BWI76_RS09750 | 0.31 | -0.2 | |
2,045,778 | - | BWI76_RS09750 | 0.72 | +0.2 | |
2,045,796 | + | BWI76_RS09750 | 0.75 | -0.4 | |
2,045,934 | + | +0.2 | |||
2,045,999 | - | +0.8 | |||
2,046,054 | - | -0.9 | |||
2,046,172 | + | -2.1 | |||
2,046,342 | - | BWI76_RS09755 | 0.17 | -1.0 | |
2,046,471 | + | BWI76_RS09755 | 0.29 | -1.5 | |
2,046,808 | - | BWI76_RS09755 | 0.60 | -0.8 | |
2,046,851 | + | BWI76_RS09755 | 0.64 | -0.6 | |
2,046,910 | - | BWI76_RS09755 | 0.69 | -1.6 | |
2,046,910 | - | BWI76_RS09755 | 0.69 | -1.1 | |
2,046,931 | + | BWI76_RS09755 | 0.71 | -1.0 | |
2,046,972 | - | BWI76_RS09755 | 0.75 | -0.9 | |
2,047,428 | + | +0.8 | |||
2,048,002 | + | BWI76_RS09760 | 0.53 | -0.0 | |
2,048,002 | + | BWI76_RS09760 | 0.53 | -0.9 | |
2,048,002 | + | BWI76_RS09760 | 0.53 | +0.3 | |
2,048,119 | - | BWI76_RS09760 | 0.63 | +0.9 |
Or see this region's nucleotide sequence