Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21255

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21250 and BWI76_RS21255 overlap by 14 nucleotidesBWI76_RS21255 and BWI76_RS21260 are separated by 13 nucleotides BWI76_RS21250: BWI76_RS21250 - two-component system response regulator GlrR, at 4,448,887 to 4,450,224 _RS21250 BWI76_RS21255: BWI76_RS21255 - hypothetical protein, at 4,450,211 to 4,450,915 _RS21255 BWI76_RS21260: BWI76_RS21260 - two-component sensor histidine kinase, at 4,450,929 to 4,452,383 _RS21260 Position (kb) 4450 4451Strain fitness (log2 ratio) -1 0 1at 4449.382 kb on - strand, within BWI76_RS21250at 4449.451 kb on + strand, within BWI76_RS21250at 4449.855 kb on + strandat 4449.875 kb on + strand, within BWI76_RS21250at 4449.883 kb on - strand, within BWI76_RS21250at 4449.962 kb on - strand, within BWI76_RS21250at 4449.962 kb on - strand, within BWI76_RS21250at 4450.023 kb on + strand, within BWI76_RS21250at 4450.055 kb on + strand, within BWI76_RS21250at 4450.420 kb on - strand, within BWI76_RS21255at 4450.468 kb on - strand, within BWI76_RS21255at 4450.473 kb on + strand, within BWI76_RS21255at 4450.481 kb on - strandat 4450.524 kb on - strand, within BWI76_RS21255at 4450.689 kb on + strand, within BWI76_RS21255at 4451.054 kb on + strandat 4451.054 kb on + strandat 4451.054 kb on + strandat 4451.062 kb on - strandat 4451.088 kb on - strand, within BWI76_RS21260at 4451.483 kb on - strand, within BWI76_RS21260at 4451.546 kb on + strand, within BWI76_RS21260at 4451.694 kb on + strand, within BWI76_RS21260

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
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4,449,382 - BWI76_RS21250 0.37 -0.5
4,449,451 + BWI76_RS21250 0.42 -0.6
4,449,855 + +0.5
4,449,875 + BWI76_RS21250 0.74 -1.2
4,449,883 - BWI76_RS21250 0.74 +0.1
4,449,962 - BWI76_RS21250 0.80 -0.4
4,449,962 - BWI76_RS21250 0.80 +0.3
4,450,023 + BWI76_RS21250 0.85 -0.6
4,450,055 + BWI76_RS21250 0.87 -0.3
4,450,420 - BWI76_RS21255 0.30 -0.6
4,450,468 - BWI76_RS21255 0.36 -0.9
4,450,473 + BWI76_RS21255 0.37 -1.3
4,450,481 - +1.7
4,450,524 - BWI76_RS21255 0.44 -1.1
4,450,689 + BWI76_RS21255 0.68 -1.0
4,451,054 + -0.4
4,451,054 + -1.0
4,451,054 + -1.1
4,451,062 - +1.3
4,451,088 - BWI76_RS21260 0.11 -1.7
4,451,483 - BWI76_RS21260 0.38 +0.1
4,451,546 + BWI76_RS21260 0.42 -1.3
4,451,694 + BWI76_RS21260 0.53 +0.5

Or see this region's nucleotide sequence