Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19030

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
3,950,824	+		BWI76_RS19025	0.51	+0.6
3,950,829	+		BWI76_RS19025	0.51	-0.1
3,950,839	-		BWI76_RS19025	0.52	+0.1
3,950,869	-		BWI76_RS19025	0.54	+0.9
3,950,915	+		BWI76_RS19025	0.57	-0.3
3,950,923	-		BWI76_RS19025	0.58	+0.2
3,950,977	+		BWI76_RS19025	0.62	+0.2
3,951,021	-		BWI76_RS19025	0.65	+1.7
3,951,021	-		BWI76_RS19025	0.65	-0.1
3,951,021	-		BWI76_RS19025	0.65	+1.1
3,951,129	-		BWI76_RS19025	0.73	+0.8
3,951,199	+		BWI76_RS19025	0.78	+0.4
3,951,206	+		BWI76_RS19025	0.78	-1.0
3,951,234	+		BWI76_RS19025	0.80	+1.2
3,951,242	-		BWI76_RS19025	0.81	+0.9
3,951,242	-		BWI76_RS19025	0.81	+0.7
3,951,242	-		BWI76_RS19025	0.81	+0.8
3,951,251	-		BWI76_RS19025	0.81	+0.2
3,951,346	-		BWI76_RS19025	0.88	+0.2
3,951,348	+				+0.7
3,951,356	-		BWI76_RS19025	0.89	-0.7
3,951,356	-		BWI76_RS19025	0.89	+0.4
3,951,356	-		BWI76_RS19025	0.89	+0.2
3,951,356	-		BWI76_RS19025	0.89	-0.5
3,951,356	-		BWI76_RS19025	0.89	-0.1
3,951,356	-		BWI76_RS19025	0.89	+2.8
3,951,356	-		BWI76_RS19025	0.89	+0.4
3,951,440	-				+0.5
3,951,440	-				-0.1
3,951,460	-				+0.5
3,951,465	-				-0.1
3,951,465	-				-0.0
3,951,470	-				-0.6
3,951,471	-				-0.5
3,951,471	-				-0.1
3,951,471	-				+0.6
3,951,471	-				-0.0
3,951,471	-				+0.2
3,951,471	-				+0.1
3,951,486	-				+0.2
3,951,505	-				+0.4
3,951,542	+				-0.8
3,951,550	-				-0.2
3,951,550	-				-0.2
3,951,550	-				-1.1
3,951,550	-				+0.5
3,951,550	-				-0.4
3,951,551	-				+0.3
3,951,573	-				+1.9
3,951,574	-				+0.2
3,951,574	-				+2.5
3,951,584	+				-0.1
3,951,585	-				-1.3
3,951,585	-				-0.3
3,951,585	-				-0.7
3,951,585	-				+0.5
3,951,592	-				+1.0
3,951,767	-				+0.8
3,951,767	-				+0.1
3,951,905	-				-0.6
3,951,912	-		BWI76_RS19030	0.15	+0.5
3,951,946	-		BWI76_RS19030	0.18	+0.6
3,951,946	-		BWI76_RS19030	0.18	-1.0
3,952,032	-		BWI76_RS19030	0.25	+0.3
3,952,104	-		BWI76_RS19030	0.31	+0.3
3,952,104	-		BWI76_RS19030	0.31	+0.1
3,952,104	-		BWI76_RS19030	0.31	+0.4
3,952,109	-		BWI76_RS19030	0.31	+0.1
3,952,114	-		BWI76_RS19030	0.32	-0.3
3,952,114	-		BWI76_RS19030	0.32	+0.4
3,952,184	-		BWI76_RS19030	0.37	+1.1
3,952,240	-		BWI76_RS19030	0.42	-0.0
3,952,256	-		BWI76_RS19030	0.43	-0.3
3,952,280	-		BWI76_RS19030	0.45	-0.7
3,952,280	-		BWI76_RS19030	0.45	+0.6
3,952,280	-		BWI76_RS19030	0.45	+1.4
3,952,281	-		BWI76_RS19030	0.45	+0.6
3,952,325	-		BWI76_RS19030	0.49	-0.1
3,952,331	-		BWI76_RS19030	0.50	+0.6
3,952,331	-		BWI76_RS19030	0.50	-1.1
3,952,331	-				-0.7
3,952,331	-		BWI76_RS19030	0.50	-0.1
3,952,331	-		BWI76_RS19030	0.50	+0.5
3,952,331	-		BWI76_RS19030	0.50	+1.0
3,952,331	-		BWI76_RS19030	0.50	+1.1
3,952,331	-		BWI76_RS19030	0.50	+0.2
3,952,337	-		BWI76_RS19030	0.50	+0.3
3,952,405	-		BWI76_RS19030	0.56	+0.5
3,952,415	-		BWI76_RS19030	0.57	+0.7
3,952,434	-		BWI76_RS19030	0.58	-0.5
3,952,526	-		BWI76_RS19030	0.66	+0.9
3,952,638	-		BWI76_RS19030	0.75	+0.0
3,952,716	-		BWI76_RS19030	0.81	+0.3
3,952,729	-		BWI76_RS19030	0.83	+1.7
3,952,747	-		BWI76_RS19030	0.84	+0.7
3,952,748	-		BWI76_RS19030	0.84	+0.6
3,952,793	-		BWI76_RS19030	0.88	+0.4
3,952,863	-				+0.5
3,952,868	-				-0.2
3,952,868	-				+0.6
3,952,868	-				+0.1
3,952,868	-				-0.5
3,952,868	-				+0.0
3,952,868	-				-0.4
3,952,868	-				+1.0
3,952,918	-				+0.6
3,952,927	-				-0.1
3,952,927	-				+0.2
3,952,927	-				+0.2
3,952,937	-				+0.6
3,952,937	-				+0.4
3,953,018	-				+0.6
3,953,033	-				+1.7
3,953,066	-				+0.5
3,953,199	-				+2.4
3,953,209	-				-1.2
3,953,209	-				+0.6
3,953,512	-		BWI76_RS19035	0.23	+0.1
3,953,512	-		BWI76_RS19035	0.23	-1.9
3,953,524	-		BWI76_RS19035	0.25	-2.7
3,953,539	-		BWI76_RS19035	0.26	+0.2
3,953,578	-		BWI76_RS19035	0.31	-2.3
3,953,578	-		BWI76_RS19035	0.31	-0.5
3,953,578	-		BWI76_RS19035	0.31	-2.3
3,953,578	-		BWI76_RS19035	0.31	-2.1
3,953,578	-		BWI76_RS19035	0.31	-3.2
3,953,578	-		BWI76_RS19035	0.31	-2.1
3,953,580	-		BWI76_RS19035	0.31	-2.3
3,953,635	-		BWI76_RS19035	0.37	-1.8
3,953,638	-		BWI76_RS19035	0.37	-1.7
3,953,638	-		BWI76_RS19035	0.37	-1.7
3,953,638	-		BWI76_RS19035	0.37	-0.1
3,953,645	-		BWI76_RS19035	0.38	-0.3
3,953,683	-		BWI76_RS19035	0.42	-3.1
3,953,692	-		BWI76_RS19035	0.43	+1.7
3,953,709	-		BWI76_RS19035	0.45	-1.0
3,953,823	-		BWI76_RS19035	0.58	+0.3
3,953,851	-		BWI76_RS19035	0.61	-3.0
3,953,859	-		BWI76_RS19035	0.62	-2.2