Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16335

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16330 and BWI76_RS16335 are separated by 177 nucleotidesBWI76_RS16335 and BWI76_RS16340 are separated by 103 nucleotides BWI76_RS16330: BWI76_RS16330 - oxidoreductase, at 3,389,727 to 3,390,767 _RS16330 BWI76_RS16335: BWI76_RS16335 - division septum protein Blr, at 3,390,945 to 3,391,094 _RS16335 BWI76_RS16340: BWI76_RS16340 - aryl-phospho-beta-D-glucosidase, at 3,391,198 to 3,392,568 _RS16340 Position (kb) 3390 3391 3392Strain fitness (log2 ratio) -1 0 1at 3390.090 kb on + strand, within BWI76_RS16330at 3390.199 kb on - strand, within BWI76_RS16330at 3390.437 kb on - strand, within BWI76_RS16330at 3390.553 kb on - strand, within BWI76_RS16330at 3390.856 kb on - strandat 3391.018 kb on - strand, within BWI76_RS16335at 3391.100 kb on + strandat 3391.237 kb on + strandat 3391.303 kb on - strandat 3391.330 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
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3,390,090 + BWI76_RS16330 0.35 +1.7
3,390,199 - BWI76_RS16330 0.45 -0.0
3,390,437 - BWI76_RS16330 0.68 +0.5
3,390,553 - BWI76_RS16330 0.79 +1.0
3,390,856 - -0.4
3,391,018 - BWI76_RS16335 0.49 -1.1
3,391,100 + -0.4
3,391,237 + +0.2
3,391,303 - -0.4
3,391,330 - -0.1

Or see this region's nucleotide sequence