Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12615
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 2,632,089 | - | BWI76_RS12610 | 0.10 | -0.1 | |
| 2,632,100 | - | BWI76_RS12610 | 0.11 | +0.1 | |
| 2,632,723 | - | BWI76_RS12610 | 0.82 | +0.3 | |
| 2,632,908 | - | +0.7 | |||
| 2,633,143 | - | BWI76_RS12615 | 0.21 | +0.3 | |
| 2,633,145 | + | BWI76_RS12615 | 0.21 | +0.8 | |
| 2,633,596 | + | BWI76_RS12615 | 0.71 | +1.3 | |
| 2,633,609 | - | BWI76_RS12615 | 0.72 | -0.3 | |
| 2,633,721 | + | BWI76_RS12615 | 0.85 | -0.6 | |
| 2,633,726 | + | BWI76_RS12615 | 0.85 | +0.2 | |
| 2,633,729 | - | BWI76_RS12615 | 0.86 | +0.4 | |
| 2,633,954 | + | +0.0 | |||
| 2,633,962 | - | +0.5 | |||
| 2,634,002 | - | -0.0 | |||
| 2,634,265 | - | BWI76_RS12620 | 0.25 | +0.4 | |
| 2,634,265 | - | BWI76_RS12620 | 0.25 | -0.1 | |
| 2,634,347 | + | BWI76_RS12620 | 0.33 | -1.6 | |
| 2,634,382 | - | BWI76_RS12620 | 0.37 | -0.2 | |
| 2,634,382 | - | BWI76_RS12620 | 0.37 | -1.7 | |
| 2,634,382 | - | BWI76_RS12620 | 0.37 | -1.3 | |
| 2,634,392 | - | BWI76_RS12620 | 0.38 | -0.3 | |
| 2,634,621 | + | BWI76_RS12620 | 0.61 | -0.1 |
Or see this region's nucleotide sequence