Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05805

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
1,218,859	+				+0.4
1,218,920	-		BWI76_RS05795	0.14	+0.4
1,218,934	-		BWI76_RS05795	0.16	-0.1
1,219,129	+		BWI76_RS05795	0.43	+0.1
1,219,137	-				-0.6
1,219,192	-		BWI76_RS05795	0.51	+0.8
1,219,233	-		BWI76_RS05795	0.57	+0.0
1,219,320	-		BWI76_RS05795	0.68	+0.2
1,219,380	+		BWI76_RS05795	0.77	+0.3
1,219,532	-				+0.3
1,219,752	+		BWI76_RS05800	0.83	-0.1
1,219,947	-		BWI76_RS05805	0.24	+1.3
1,219,965	-		BWI76_RS05805	0.27	+0.2
1,219,980	-		BWI76_RS05805	0.30	+0.3
1,219,996	+		BWI76_RS05805	0.32	+0.4
1,220,092	+		BWI76_RS05805	0.49	+0.4
1,220,105	-		BWI76_RS05805	0.52	-0.1
1,220,161	+		BWI76_RS05805	0.62	+1.2
1,220,166	+		BWI76_RS05805	0.62	+0.1
1,220,166	+		BWI76_RS05805	0.62	-0.3
1,220,166	+		BWI76_RS05805	0.62	-0.3
1,220,213	+		BWI76_RS05805	0.71	+0.1
1,220,221	-		BWI76_RS05805	0.72	+0.2
1,220,361	+				-0.4
1,220,432	-		BWI76_RS05810	0.48	+0.8
1,220,628	+				-2.3
1,220,638	+				+0.2
1,220,638	+				+0.9
1,220,656	+				-0.1
1,220,656	+				-1.3
1,220,664	-				+0.1
1,220,672	+				+0.1
1,220,672	+				-0.1
1,220,672	+				+0.3
1,220,677	+				+0.2
1,220,677	+				+0.7
1,220,734	-				-0.1
1,220,774	+				+0.0
1,220,783	+				-1.1
1,220,791	-				-0.2
1,220,796	+				+0.9
1,220,806	+				+0.7
1,220,814	-				-0.4
1,220,818	+				-0.4
1,220,818	+				+0.9
1,220,819	+				-0.2
1,220,819	+				-0.1
1,220,819	+				+2.3
1,220,819	+				-0.2
1,220,829	+				-0.2
1,220,829	+				+0.2
1,220,829	+				+0.2
1,220,829	+				-0.5
1,220,829	+				+0.2
1,220,829	+				+0.2
1,220,829	+				+0.0
1,220,829	+				+0.1
1,220,830	+				+0.2
1,220,830	+				-0.4
1,220,830	+				+0.1
1,220,831	+				+0.0
1,220,837	-				-0.7
1,220,837	-				+0.2
1,220,837	-				-0.9
1,220,837	-				-0.2
1,220,837	-				+0.0
1,220,838	-				+0.4
1,220,838	-				-0.4
1,220,838	-				-0.6
1,220,838	-				-2.1
1,220,838	-				-0.4
1,220,839	-				+0.5
1,220,839	-				+1.0
1,220,841	+				+0.0
1,220,841	+				-0.2
1,220,855	+				+0.1
1,220,855	+				+0.9
1,220,856	+				-0.1
1,220,856	+				-0.6
1,220,856	+				+0.1
1,220,856	+				+1.9
1,220,863	-				-0.3
1,220,863	-				-0.5
1,220,864	-				+0.2
1,220,865	+				+0.5
1,220,865	+				-0.4
1,220,865	+				+0.4
1,220,865	+				-0.4
1,220,865	+				+0.1
1,220,867	+				+0.5
1,220,869	+				-0.2
1,220,871	-				+0.0
1,220,873	-				+0.0
1,220,873	-				+0.0
1,220,873	-				-0.8
1,220,873	-				-0.6
1,220,875	+				+0.5
1,220,875	-				+0.4
1,220,875	-				+0.6
1,220,875	-				-0.1
1,220,875	-				-0.1
1,220,875	-				+0.0
1,220,883	-				-0.1
1,220,930	+				+1.1
1,220,930	+				+0.3
1,220,935	+				+1.0
1,220,938	-				-0.2
1,220,938	-				+0.4
1,220,938	-				-0.1
1,220,941	-				-0.2
1,220,964	+		BWI76_RS05815	0.11	-0.5
1,220,966	+		BWI76_RS05815	0.12	+1.5
1,220,974	-		BWI76_RS05815	0.13	+0.4
1,220,976	+		BWI76_RS05815	0.13	+0.4
1,220,976	+		BWI76_RS05815	0.13	+0.3
1,220,976	+		BWI76_RS05815	0.13	-0.0
1,220,984	-		BWI76_RS05815	0.15	-0.6
1,220,991	+		BWI76_RS05815	0.16	-0.3
1,221,021	+		BWI76_RS05815	0.20	-0.0
1,221,023	+		BWI76_RS05815	0.20	+0.4
1,221,028	+		BWI76_RS05815	0.21	-0.5
1,221,028	+		BWI76_RS05815	0.21	+0.2
1,221,028	+		BWI76_RS05815	0.21	-1.7
1,221,028	+		BWI76_RS05815	0.21	-0.2
1,221,028	+		BWI76_RS05815	0.21	+1.2
1,221,029	-		BWI76_RS05815	0.21	-0.8
1,221,029	-		BWI76_RS05815	0.21	+0.5
1,221,029	-		BWI76_RS05815	0.21	+0.5
1,221,033	+		BWI76_RS05815	0.22	+0.8
1,221,033	+		BWI76_RS05815	0.22	+0.3
1,221,033	+		BWI76_RS05815	0.22	-2.2
1,221,033	+		BWI76_RS05815	0.22	+0.8
1,221,033	+		BWI76_RS05815	0.22	+0.2
1,221,033	+		BWI76_RS05815	0.22	+0.7
1,221,033	+		BWI76_RS05815	0.22	+0.1
1,221,033	+		BWI76_RS05815	0.22	+0.4
1,221,036	-		BWI76_RS05815	0.22	+0.4
1,221,036	-		BWI76_RS05815	0.22	-0.0
1,221,041	-		BWI76_RS05815	0.23	-0.9
1,221,041	-		BWI76_RS05815	0.23	-0.1
1,221,041	-		BWI76_RS05815	0.23	+1.5
1,221,041	-		BWI76_RS05815	0.23	+0.5
1,221,046	+		BWI76_RS05815	0.24	-0.0
1,221,078	+		BWI76_RS05815	0.29	-0.3
1,221,078	+		BWI76_RS05815	0.29	-0.4
1,221,078	+		BWI76_RS05815	0.29	+0.5
1,221,078	+		BWI76_RS05815	0.29	-0.0
1,221,078	+		BWI76_RS05815	0.29	+1.6
1,221,078	+		BWI76_RS05815	0.29	+1.2
1,221,078	+		BWI76_RS05815	0.29	+0.7
1,221,078	+		BWI76_RS05815	0.29	-0.1
1,221,078	+		BWI76_RS05815	0.29	+0.5
1,221,078	+		BWI76_RS05815	0.29	+0.6
1,221,086	-		BWI76_RS05815	0.30	+0.5
1,221,087	-		BWI76_RS05815	0.30	-0.7
1,221,098	+		BWI76_RS05815	0.32	-0.3
1,221,098	-		BWI76_RS05815	0.32	-0.2
1,221,106	-		BWI76_RS05815	0.33	+0.3
1,221,156	-		BWI76_RS05815	0.41	-0.5