Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0824

Experiment: Pectin from apple; filtered 1 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from apple; filtered 1 mg/ml (C)
1,017,670	-		BT_0823	0.48	-1.0
1,017,804	+		BT_0823	0.57	-1.0
1,017,831	-		BT_0823	0.59	-0.0
1,017,941	+		BT_0823	0.67	-2.0
1,017,942	-		BT_0823	0.67	-0.6
1,017,945	-		BT_0823	0.67	-1.0
1,018,099	-		BT_0823	0.78	-2.6
1,018,099	-		BT_0823	0.78	-5.1
1,018,118	-		BT_0823	0.80	-0.0
1,018,119	+		BT_0823	0.80	-1.6
1,018,270	-				-2.0
1,018,280	+				-0.0
1,018,747	-		BT0824	0.10	-4.4
1,018,820	+		BT0824	0.17	+0.5
1,018,822	+		BT0824	0.18	-1.5
1,018,985	-		BT0824	0.33	-1.0
1,019,032	-		BT0824	0.38	-2.0
1,019,147	-		BT0824	0.49	-1.6
1,019,375	+		BT0824	0.71	-0.5
1,019,441	+		BT0824	0.78	+1.0
1,019,459	-		BT0824	0.79	-2.0
1,019,693	-				-1.0
1,019,693	-				-1.0
1,019,706	+				-3.8
1,019,861	-				-1.6
1,020,312	+		BT0825	0.43	+1.0
1,020,315	-		BT0825	0.43	-3.4
1,020,315	-		BT0825	0.43	-2.0
1,020,328	-		BT0825	0.44	-1.0
1,020,581	+		BT0825	0.61	-0.0