Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2102

Experiment: Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C)
2,635,611	-		BT2101	0.30	-1.1
2,635,616	-		BT2101	0.30	-0.4
2,635,617	+		BT2101	0.30	-1.2
2,635,618	-		BT2101	0.30	-1.6
2,635,618	-		BT2101	0.30	-1.0
2,635,703	-		BT2101	0.36	-0.0
2,635,734	-		BT2101	0.39	-0.0
2,635,740	+		BT2101	0.39	-0.3
2,635,743	+		BT2101	0.39	-0.6
2,635,821	-		BT2101	0.45	-0.0
2,635,823	+		BT2101	0.45	-2.1
2,635,824	-		BT2101	0.45	-0.0
2,635,841	+		BT2101	0.47	-1.6
2,635,846	+		BT2101	0.47	-0.2
2,635,914	-		BT2101	0.52	-0.4
2,635,934	-		BT2101	0.53	-0.5
2,635,936	-		BT2101	0.54	-2.0
2,635,940	+		BT2101	0.54	-0.7
2,635,987	-		BT2101	0.57	-0.4
2,635,987	-		BT2101	0.57	-1.0
2,636,062	+		BT2101	0.63	-0.0
2,636,089	+		BT2101	0.65	-0.4
2,636,089	+		BT2101	0.65	-2.0
2,636,089	+		BT2101	0.65	-0.0
2,636,089	+		BT2101	0.65	+1.6
2,636,130	+		BT2101	0.68	-0.8
2,636,187	+		BT2101	0.72	-1.6
2,636,231	+		BT2101	0.75	-0.0
2,636,244	+		BT2101	0.76	-2.3
2,636,287	-		BT2101	0.79	-1.3
2,636,328	-		BT2101	0.82	-0.2
2,636,343	+		BT2101	0.84	-2.3
2,636,348	+		BT2101	0.84	-2.6
2,636,363	-		BT2101	0.85	+1.0
2,636,569	+				-0.0
2,636,570	-				-0.9
2,636,614	+				-2.0
2,636,615	-				-0.7
2,636,644	-		BT2102	0.12	-1.0
2,636,644	-		BT2102	0.12	-1.6
2,636,653	+		BT2102	0.13	-3.5
2,636,654	-		BT2102	0.13	-1.9
2,636,692	-		BT2102	0.20	-1.9
2,636,750	+		BT2102	0.30	-1.7
2,636,887	+		BT2102	0.55	-1.4
2,636,887	+		BT2102	0.55	-0.0
2,636,914	-		BT2102	0.59	-3.6
2,636,915	+		BT2102	0.60	-0.0
2,637,065	+		BT2102	0.86	-1.1
2,637,066	-		BT2102	0.86	-1.7
2,637,075	+		BT2102	0.88	-1.4
2,637,075	+		BT2102	0.88	-1.6
2,637,138	+				-1.0
2,637,138	+				-1.6
2,637,162	+				-1.0
2,637,164	+				-1.3
2,637,202	-				-0.6
2,637,274	-		BT2103	0.14	-1.6
2,637,323	+		BT2103	0.21	-0.0
2,637,345	+		BT2103	0.24	+1.6
2,637,381	-		BT2103	0.29	-2.3
2,637,395	-		BT2103	0.31	-1.0
2,637,444	+		BT2103	0.37	-1.0
2,637,462	+		BT2103	0.40	+0.2
2,637,462	+		BT2103	0.40	-1.3
2,637,561	+		BT2103	0.53	-1.0
2,637,576	+		BT2103	0.55	+1.0
2,637,601	+		BT2103	0.59	-0.6
2,637,730	-		BT2103	0.76	+1.0
2,637,832	-				-0.4
2,637,864	-				-2.0
2,637,896	-				-0.0
2,638,025	+				-0.5
2,638,058	+				-1.0
2,638,073	+				-0.0
2,638,121	+				-1.3
2,638,122	-				-1.6
2,638,124	+				-2.0