Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4609

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
6,033,536	+				-0.6
6,033,548	-				-0.3
6,033,548	-				+1.0
6,033,561	+				+2.0
6,033,589	+				-0.0
6,033,590	-				-0.6
6,033,591	+				-0.0
6,033,592	-				-1.6
6,033,592	-				-0.0
6,033,594	-				-0.0
6,033,599	-				-1.9
6,033,715	+		BT4607	0.32	+0.6
6,033,735	+		BT4607	0.36	-0.0
6,033,735	+		BT4607	0.36	+1.2
6,033,747	+		BT4607	0.39	-1.0
6,033,750	+		BT4607	0.40	-0.9
6,033,833	-		BT4607	0.59	-0.0
6,033,869	-		BT4607	0.67	+0.2
6,034,008	-				-1.3
6,034,024	-				-1.4
6,034,105	-		BT4608	0.21	-1.6
6,034,117	+		BT4608	0.24	-1.6
6,034,125	+		BT4608	0.26	-0.6
6,034,125	+		BT4608	0.26	-1.1
6,034,126	-		BT4608	0.26	-0.6
6,034,130	-		BT4608	0.27	+0.2
6,034,130	-		BT4608	0.27	-0.0
6,034,229	-		BT4608	0.54	-2.0
6,034,230	+		BT4608	0.54	+1.0
6,034,230	+		BT4608	0.54	-1.3
6,034,245	+		BT4608	0.58	-1.6
6,034,265	-		BT4608	0.63	-1.6
6,034,306	-		BT4608	0.74	-0.9
6,034,310	-		BT4608	0.75	-1.0
6,034,310	-		BT4608	0.75	-1.6
6,034,393	-				-1.3
6,034,401	-				-0.0
6,034,451	-				+0.2
6,034,568	+				-2.0
6,034,615	+				-1.0
6,034,864	+		BT4609	0.35	-1.2
6,034,873	+		BT4609	0.36	-0.2
6,034,897	+		BT4609	0.38	-0.0
6,034,897	+		BT4609	0.38	-0.4
6,034,904	+		BT4609	0.39	-0.8
6,034,913	-		BT4609	0.40	-2.0
6,034,927	+		BT4609	0.41	-2.8
6,034,976	-		BT4609	0.46	-0.0
6,035,164	+		BT4609	0.65	-1.0
6,035,239	+		BT4609	0.72	-1.0
6,035,264	-		BT4609	0.75	-1.6
6,035,292	+		BT4609	0.78	+2.6
6,035,296	+		BT4609	0.78	-2.0
6,035,313	-		BT4609	0.80	+0.2
6,035,380	+		BT4609	0.87	-1.6
6,035,381	-		BT4609	0.87	+0.4
6,035,464	-				-1.8
6,035,490	+				+1.6
6,035,496	-				-1.0
6,035,497	+				-1.0
6,035,498	-				-1.5
6,035,501	+				-1.6
6,035,545	-				-0.8
6,035,582	-				-1.5
6,035,593	-				-0.8
6,035,627	-				-0.6
6,035,630	-				-1.4
6,035,772	+		BT4610	0.11	-1.0
6,035,777	-		BT4610	0.12	-2.0
6,035,982	-		BT4610	0.31	-0.6
6,036,224	-		BT4610	0.55	-0.8
6,036,232	+		BT4610	0.56	+1.0