Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3902

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
5,072,046	+		BT3900	0.70	-1.0
5,072,079	-		BT3900	0.84	-1.4
5,072,097	-				+0.1
5,072,152	+				-0.8
5,072,158	-				-2.3
5,072,225	+				-1.1
5,072,226	-				+0.0
5,072,228	+				+0.0
5,072,229	-				+1.0
5,072,229	-				-1.6
5,072,321	-		BT3901	0.14	-2.6
5,072,353	+		BT3901	0.19	-1.0
5,072,354	-		BT3901	0.19	+1.0
5,072,358	+		BT3901	0.19	-0.9
5,072,363	-		BT3901	0.20	-2.1
5,072,409	+		BT3901	0.27	-1.6
5,072,409	+		BT3901	0.27	-1.3
5,072,410	-		BT3901	0.27	-0.9
5,072,452	+		BT3901	0.34	-0.5
5,072,452	+		BT3901	0.34	-1.3
5,072,452	+		BT3901	0.34	+0.0
5,072,453	-		BT3901	0.34	-1.9
5,072,453	-		BT3901	0.34	-1.0
5,072,461	+		BT3901	0.35	-2.3
5,072,509	+		BT3901	0.42	-2.0
5,072,509	+		BT3901	0.42	-1.0
5,072,510	-		BT3901	0.42	+0.0
5,072,518	+		BT3901	0.44	+0.2
5,072,587	-		BT3901	0.54	+1.0
5,072,592	+		BT3901	0.55	+1.0
5,072,633	+		BT3901	0.61	-1.1
5,072,770	+		BT3901	0.82	+1.0
5,072,848	+				+0.7
5,072,860	-				-0.7
5,072,863	-				+2.0
5,072,943	-				-1.9
5,072,958	-				+0.0
5,072,959	+				-1.0
5,072,960	-				-1.0
5,072,960	-				-1.6
5,072,983	-				+0.0
5,072,983	-				+0.0
5,073,002	-				+0.0
5,073,056	+				-0.5
5,073,057	-				-2.0
5,073,057	-				-1.1
5,073,058	+				-1.3
5,073,067	-				+0.0
5,073,104	-				-1.2
5,073,104	-				-1.6
5,073,141	+		BT3902	0.10	-1.8
5,073,158	-		BT3902	0.12	-1.6
5,073,194	+		BT3902	0.15	-2.2
5,073,338	+		BT3902	0.26	-1.6
5,073,418	-				-1.0
5,073,418	-		BT3902	0.32	-0.8
5,073,460	-		BT3902	0.36	-0.8
5,073,484	+		BT3902	0.38	-0.2
5,073,492	+		BT3902	0.38	-1.0
5,073,498	+		BT3902	0.39	-2.0
5,073,514	+		BT3902	0.40	-1.2
5,073,515	-		BT3902	0.40	-1.4
5,073,520	-		BT3902	0.41	+1.0
5,073,557	-		BT3902	0.43	-2.3
5,073,637	-		BT3902	0.50	-1.4
5,073,648	+		BT3902	0.51	+0.6
5,073,649	-		BT3902	0.51	-2.0
5,073,664	-		BT3902	0.52	-1.7
5,073,724	+		BT3902	0.57	+1.6
5,073,730	-		BT3902	0.57	-1.3
5,073,789	+		BT3902	0.62	-1.9
5,073,792	-		BT3902	0.62	+0.0
5,073,842	+		BT3902	0.66	+2.0
5,073,842	+		BT3902	0.66	-1.6
5,073,842	+		BT3902	0.66	+0.0
5,073,843	-		BT3902	0.66	-1.4
5,073,931	+		BT3902	0.73	-0.6
5,073,931	+		BT3902	0.73	-1.6
5,073,932	-		BT3902	0.73	-0.9
5,074,039	+		BT3902	0.82	-0.3
5,074,096	-		BT3902	0.86	+1.0
5,074,111	+		BT3902	0.87	+0.0
5,074,257	+				+1.0
5,074,274	+				-1.7
5,074,274	+				-1.7
5,074,279	-				-1.2
5,074,285	-				-0.5
5,074,287	+				-2.0
5,074,343	+				-0.3
5,074,355	-				-1.0
5,074,356	+				-0.6
5,074,371	+				+0.5
5,074,403	+		BT3903	0.11	-0.0
5,074,598	+		BT3903	0.28	-1.0
5,074,598	+		BT3903	0.28	-2.6
5,074,599	-		BT3903	0.28	-2.3
5,074,599	-		BT3903	0.28	-1.4
5,074,673	+		BT3903	0.34	-0.6
5,074,673	+		BT3903	0.34	-2.3
5,074,674	-		BT3903	0.34	-1.6
5,074,681	-		BT3903	0.35	-1.3
5,074,694	+		BT3903	0.36	-1.9
5,074,845	-		BT3903	0.49	-1.3
5,074,872	+		BT3903	0.51	-0.7
5,074,872	+		BT3903	0.51	-0.3
5,074,875	-		BT3903	0.51	-1.6
5,074,976	+		BT3903	0.60	-1.6
5,074,977	-		BT3903	0.60	-0.0
5,075,061	+		BT3903	0.67	-1.7
5,075,190	+		BT3903	0.78	-1.0
5,075,190	+		BT3903	0.78	-1.6
5,075,198	+		BT3903	0.79	-0.9