Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1274

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
1,583,873	+		BT1273	0.58	-1.0
1,583,931	+		BT1273	0.61	+1.5
1,584,000	+		BT1273	0.65	-1.6
1,584,217	-		BT1273	0.78	-0.0
1,584,219	+		BT1273	0.78	-0.0
1,584,394	+		BT1273	0.88	-0.2
1,584,439	+				-0.0
1,584,439	+				-0.6
1,584,509	+				-1.7
1,584,509	+				+2.0
1,584,510	-				-0.0
1,584,588	+				+0.5
1,584,604	-				+0.5
1,584,666	+				-0.0
1,584,699	+				-1.3
1,584,700	-				+2.0
1,584,712	-				-0.6
1,584,725	-				-1.2
1,584,899	-		BT1274	0.27	+2.0
1,584,902	-		BT1274	0.28	-1.1
1,584,941	-		BT1274	0.34	-1.6
1,584,987	+		BT1274	0.41	-0.0
1,584,988	-		BT1274	0.41	-2.0
1,584,993	+		BT1274	0.42	-0.0
1,585,108	-		BT1274	0.60	-0.0
1,585,210	-		BT1274	0.76	+0.1
1,585,236	-		BT1274	0.80	-0.0
1,585,246	+		BT1274	0.82	-0.6
1,585,275	+		BT1274	0.86	-1.0
1,585,361	+				-2.0
1,585,376	-				-0.4
1,585,403	+				+0.5
1,585,486	-				-0.5
1,585,558	+		BT1275	0.13	-1.0
1,585,617	+		BT1275	0.17	-0.6
1,585,618	-		BT1275	0.17	-0.0
1,585,622	-		BT1275	0.17	-0.7
1,585,723	-		BT1275	0.24	-2.0
1,585,731	+		BT1275	0.25	-1.4
1,585,751	+		BT1275	0.26	-2.0
1,585,751	+		BT1275	0.26	-1.6
1,585,752	-		BT1275	0.26	-1.6
1,585,768	-		BT1275	0.27	-2.6
1,585,768	-		BT1275	0.27	-0.7
1,585,768	-		BT1275	0.27	-0.0
1,585,773	+		BT1275	0.28	-0.2
1,585,773	+		BT1275	0.28	+0.5
1,585,774	-		BT1275	0.28	-0.8
1,585,787	-		BT1275	0.29	-0.6
1,585,828	-		BT1275	0.31	-0.0
1,585,877	+		BT1275	0.35	-1.6
1,585,881	-		BT1275	0.35	-0.0
1,586,070	+		BT1275	0.48	-1.0
1,586,208	+		BT1275	0.58	-1.6
1,586,257	-		BT1275	0.61	-1.0
1,586,352	-		BT1275	0.68	+1.0
1,586,357	-		BT1275	0.68	-1.1