Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1049

Experiment: Pectic galactan from potato; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectic galactan from potato; autoclaved 2.5 mg/ml (C)
1,329,804	+		BT1048	0.28	-0.1
1,329,833	-		BT1048	0.31	-2.4
1,329,873	+		BT1048	0.34	-0.1
1,329,873	+		BT1048	0.34	-1.1
1,329,876	-		BT1048	0.35	+0.3
1,330,070	-		BT1048	0.52	-0.6
1,330,162	-		BT1048	0.60	-0.1
1,330,232	-		BT1048	0.66	-0.7
1,330,389	+		BT1048	0.80	-2.4
1,330,400	-		BT1048	0.81	-1.1
1,330,421	-		BT1048	0.83	-0.7
1,330,511	+				-1.1
1,330,704	-				-0.3
1,330,705	+				-2.7
1,330,706	-				-0.1
1,330,820	-		BT1049	0.17	-1.1
1,330,925	+		BT1049	0.26	-2.1
1,330,945	+		BT1049	0.28	-2.7
1,330,946	-		BT1049	0.28	+0.3
1,331,034	-		BT1049	0.35	-1.5
1,331,041	-		BT1049	0.36	-0.7
1,331,079	+		BT1049	0.39	-2.3
1,331,080	-		BT1049	0.39	-1.1
1,331,116	+		BT1049	0.42	-1.7
1,331,240	-		BT1049	0.53	-1.3
1,331,329	+		BT1049	0.60	-0.1
1,331,353	-		BT1049	0.62	-1.7
1,331,410	+		BT1049	0.67	-2.7
1,331,411	-		BT1049	0.67	-1.4
1,331,455	+		BT1049	0.71	-1.7
1,331,460	-		BT1049	0.71	-1.1
1,331,462	-		BT1049	0.71	-1.1
1,331,462	-		BT1049	0.71	-0.1
1,331,510	-		BT1049	0.75	-2.7
1,331,522	-		BT1049	0.76	-0.5
1,331,543	-		BT1049	0.78	-2.1
1,331,666	+		BT1049	0.89	-0.8
1,331,693	-				-1.4
1,331,808	+				-1.4
1,331,826	-				-0.7
1,331,927	+		BT1050	0.11	-0.5
1,331,935	-		BT1050	0.12	-1.4
1,331,935	-		BT1050	0.12	-0.8
1,332,083	+		BT1050	0.28	-0.1
1,332,083	+		BT1050	0.28	+2.2
1,332,103	+		BT1050	0.30	-0.1
1,332,104	-		BT1050	0.30	-1.7
1,332,281	+		BT1050	0.50	-1.7
1,332,295	-		BT1050	0.51	+0.9
1,332,541	-		BT1050	0.79	-0.8
1,332,615	-		BT1050	0.87	+1.5
1,332,615	-		BT1050	0.87	-0.1
1,332,632	+		BT1050	0.89	+0.9
1,332,664	-				-1.1
1,332,724	-				-0.7
1,332,724	-				-0.1
1,332,735	+				+0.6