Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4622

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
6,047,453	+		BT4620	0.54	-0.4
6,047,479	-		BT4620	0.56	-1.6
6,047,491	+		BT4620	0.57	-0.4
6,047,557	-		BT4620	0.63	+1.0
6,047,587	+		BT4620	0.66	-0.6
6,047,659	-		BT4620	0.72	-2.3
6,047,701	+		BT4620	0.76	-0.0
6,047,701	+		BT4620	0.76	-1.7
6,047,824	+		BT4620	0.86	-2.0
6,047,825	-		BT4620	0.86	-1.1
6,047,828	-		BT4620	0.87	-1.0
6,047,828	-		BT4620	0.87	-1.8
6,047,828	-		BT4620	0.87	-0.0
6,047,859	-		BT4620	0.89	+1.0
6,047,859	-		BT4620	0.89	-2.6
6,047,964	-				-1.8
6,048,007	+				-1.3
6,048,015	-				-2.2
6,048,058	-				-0.5
6,048,077	+				-1.0
6,048,078	-				-0.3
6,048,081	+				-0.4
6,048,176	+		BT4621	0.25	+1.0
6,048,350	-		BT4621	0.73	-1.0
6,048,551	-		BT4622	0.13	-1.0
6,048,556	+		BT4622	0.14	-1.9
6,048,628	-		BT4622	0.22	-2.1
6,048,740	-		BT4622	0.34	-3.8
6,048,748	+		BT4622	0.35	-2.0
6,048,749	-		BT4622	0.35	-1.6
6,048,796	-		BT4622	0.40	-2.3
6,048,850	-		BT4622	0.46	-0.0
6,048,917	-		BT4622	0.54	-2.3
6,048,955	-		BT4622	0.58	-1.5
6,049,024	+		BT4622	0.66	-2.0
6,049,024	+		BT4622	0.66	-1.8
6,049,048	-		BT4622	0.68	-0.8
6,049,093	+		BT4622	0.73	-1.0
6,049,094	-		BT4622	0.73	-0.0
6,049,096	-				-1.0
6,049,105	+		BT4622	0.75	-1.9
6,049,106	-		BT4622	0.75	-0.0
6,049,132	+		BT4622	0.78	-2.6
6,049,171	+		BT4622	0.82	-1.3
6,049,274	-				-2.0
6,049,308	-				-1.0
6,049,309	+				-1.0
6,049,346	+				+1.6
6,049,349	+				-1.3
6,049,349	+				-2.2
6,049,540	-		BT4623	0.32	-2.0
6,049,654	+		BT4623	0.50	-2.1
6,049,668	+		BT4623	0.52	+0.6
6,049,668	+		BT4623	0.52	-0.0
6,049,768	-		BT4623	0.67	-0.0
6,049,785	+		BT4623	0.70	-1.0
6,049,785	+		BT4623	0.70	+1.0
6,049,785	+		BT4623	0.70	-2.0
6,049,786	-		BT4623	0.70	-2.0
6,049,788	-		BT4623	0.70	-0.5
6,049,789	+		BT4623	0.70	-1.3
6,049,801	-		BT4623	0.72	-0.0
6,049,803	+		BT4623	0.73	-2.6
6,049,804	-		BT4623	0.73	-1.6
6,049,808	+		BT4623	0.73	-0.0
6,049,814	-		BT4623	0.74	-1.0
6,049,836	+		BT4623	0.78	-1.2
6,049,840	-		BT4623	0.78	-1.7
6,049,867	-		BT4623	0.82	-1.2
6,049,870	-		BT4623	0.83	-0.8
6,049,872	+		BT4623	0.83	-1.0
6,049,879	+		BT4623	0.84	-1.0
6,049,880	-		BT4623	0.84	-2.0
6,049,882	-		BT4623	0.85	-0.3
6,049,909	-		BT4623	0.89	-1.2
6,049,913	-		BT4623	0.90	-2.1
6,049,913	-		BT4623	0.90	-1.6
6,049,915	-		BT4623	0.90	-0.0
6,049,964	+				-0.0
6,049,978	+				-1.0
6,049,992	-				-1.8
6,050,000	-				-1.6
6,050,057	-				-2.0
6,050,069	+				-2.0
6,050,069	+				-0.8
6,050,094	+				+1.0
6,050,105	+				-1.3
6,050,105	+				-0.9
6,050,168	+		BT4624	0.12	-1.6
6,050,171	+		BT4624	0.13	-1.0
6,050,211	-		BT4624	0.19	-0.5
6,050,252	-		BT4624	0.25	-0.0
6,050,258	+		BT4624	0.26	-3.8
6,050,277	-		BT4624	0.29	-0.0
6,050,280	-		BT4624	0.29	-1.0
6,050,280	-		BT4624	0.29	-0.6
6,050,289	-		BT4624	0.31	-1.0
6,050,328	-		BT4624	0.37	-0.3