Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4409

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
5,808,781	+		BT4408	0.48	-0.0
5,808,865	+		BT4408	0.54	-1.0
5,808,985	+		BT4408	0.63	-0.0
5,808,986	-		BT4408	0.63	-2.6
5,808,998	-		BT4408	0.64	-1.0
5,809,070	-		BT4408	0.69	+0.3
5,809,075	+		BT4408	0.69	-0.6
5,809,076	-		BT4408	0.69	-1.0
5,809,224	+		BT4408	0.80	-0.0
5,809,259	-		BT4408	0.83	-2.4
5,809,286	-		BT4408	0.85	-1.0
5,809,469	-				+0.5
5,809,561	-				-1.7
5,809,566	+				-0.0
5,809,575	-				-2.0
5,809,619	+				-1.1
5,809,658	+				-2.4
5,809,687	-				-0.0
5,809,732	+				-0.0
5,809,733	-				-2.6
5,809,736	+				-2.6
5,809,756	-				-0.9
5,809,950	+		BT4409	0.19	-1.3
5,809,951	-		BT4409	0.20	-1.2
5,809,953	-		BT4409	0.20	-1.5
5,809,995	-		BT4409	0.24	-0.0
5,810,197	+		BT4409	0.43	-1.0
5,810,202	-		BT4409	0.43	-1.0
5,810,206	+		BT4409	0.44	-1.1
5,810,471	+		BT4409	0.69	-1.0
5,810,512	+		BT4409	0.72	-1.0
5,810,513	-		BT4409	0.73	-0.3
5,810,518	+		BT4409	0.73	-0.5
5,810,519	-		BT4409	0.73	-0.0
5,810,561	+		BT4409	0.77	-0.0
5,810,562	-		BT4409	0.77	-1.0
5,810,594	+		BT4409	0.80	-0.6
5,810,689	-		BT4409	0.89	-2.0
5,810,861	+				-1.5
5,811,083	+				+0.5
5,811,084	-				-1.0
5,811,142	-				-1.3
5,811,175	+				-0.8
5,811,175	+				+1.6
5,811,727	-		BT4410	0.32	-1.3
5,811,749	-		BT4410	0.34	-1.2
5,811,750	+		BT4410	0.34	-2.0
5,811,765	+		BT4410	0.34	+0.3
5,811,766	-		BT4410	0.34	-2.7