Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT4383 and BT4384 are separated by 661 nucleotides BT4384 and BT4385 are separated by 193 nucleotides
BT4383: BT4383 - putative sugar kinase (NCBI ptt file), at 5,775,698 to 5,777,209
BT4383
BT4384: BT4384 - hypothetical protein (NCBI ptt file), at 5,777,871 to 5,778,095
BT4384
BT4385: BT4385 - di-tripeptide ABC transporter (NCBI ptt file), at 5,778,289 to 5,779,833
BT4385
Position (kb) 5777
5778
5779 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5776.917 kb on - strand, within BT4383 at 5776.974 kb on + strand, within BT4383 at 5776.975 kb on - strand, within BT4383 at 5777.062 kb on + strand at 5777.165 kb on - strand at 5777.167 kb on - strand at 5777.223 kb on + strand at 5777.389 kb on - strand at 5777.531 kb on - strand at 5777.572 kb on + strand at 5777.645 kb on - strand at 5777.645 kb on - strand at 5777.716 kb on + strand at 5777.720 kb on + strand at 5777.720 kb on + strand at 5777.725 kb on + strand at 5777.730 kb on + strand at 5777.730 kb on + strand at 5777.731 kb on - strand at 5777.732 kb on + strand at 5777.752 kb on + strand at 5777.753 kb on - strand at 5777.793 kb on + strand at 5777.923 kb on + strand, within BT4384 at 5777.945 kb on + strand, within BT4384 at 5777.945 kb on + strand, within BT4384 at 5778.115 kb on + strand at 5778.157 kb on - strand at 5778.236 kb on + strand at 5778.283 kb on - strand at 5778.365 kb on - strand at 5778.385 kb on - strand at 5778.440 kb on - strand at 5778.448 kb on + strand, within BT4385 at 5778.448 kb on + strand, within BT4385 at 5778.594 kb on + strand, within BT4385 at 5778.594 kb on + strand, within BT4385 at 5778.620 kb on - strand, within BT4385 at 5778.660 kb on + strand at 5778.693 kb on - strand, within BT4385 at 5778.693 kb on - strand, within BT4385 at 5778.728 kb on - strand, within BT4385 at 5778.740 kb on - strand, within BT4385 at 5778.740 kb on - strand, within BT4385 at 5778.889 kb on - strand, within BT4385 at 5778.999 kb on + strand, within BT4385 at 5779.014 kb on + strand, within BT4385 at 5779.063 kb on + strand, within BT4385 at 5779.064 kb on - strand, within BT4385
Per-strain Table
Position Strand Gene LocusTag Fraction b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) remove 5,776,917 - BT4383 0.81 -2.6 5,776,974 + BT4383 0.84 -2.0 5,776,975 - BT4383 0.84 -0.0 5,777,062 + +1.0 5,777,165 - -2.0 5,777,167 - -0.0 5,777,223 + -1.7 5,777,389 - +0.2 5,777,531 - -0.2 5,777,572 + -2.0 5,777,645 - -0.0 5,777,645 - -2.4 5,777,716 + -0.0 5,777,720 + -1.0 5,777,720 + +1.5 5,777,725 + -2.5 5,777,730 + -0.6 5,777,730 + -1.4 5,777,731 - +2.9 5,777,732 + -1.6 5,777,752 + -2.3 5,777,753 - -0.5 5,777,793 + -1.0 5,777,923 + BT4384 0.23 -1.4 5,777,945 + BT4384 0.33 -1.2 5,777,945 + BT4384 0.33 -2.6 5,778,115 + -0.6 5,778,157 - -0.0 5,778,236 + -0.0 5,778,283 - -2.6 5,778,365 - +0.4 5,778,385 - -2.0 5,778,440 - +1.3 5,778,448 + BT4385 0.10 -1.0 5,778,448 + BT4385 0.10 -0.0 5,778,594 + BT4385 0.20 -1.1 5,778,594 + BT4385 0.20 -1.2 5,778,620 - BT4385 0.21 -0.6 5,778,660 + -2.0 5,778,693 - BT4385 0.26 -1.4 5,778,693 - BT4385 0.26 -1.6 5,778,728 - BT4385 0.28 -2.2 5,778,740 - BT4385 0.29 -0.6 5,778,740 - BT4385 0.29 -1.0 5,778,889 - BT4385 0.39 -1.0 5,778,999 + BT4385 0.46 -0.6 5,779,014 + BT4385 0.47 -0.0 5,779,063 + BT4385 0.50 -1.0 5,779,064 - BT4385 0.50 -1.0
Or see this region's nucleotide sequence