Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3698

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
4,800,706	+				-1.7
4,800,708	+				-2.3
4,800,710	+				-1.0
4,800,710	+				-3.0
4,800,738	-				-0.4
4,800,768	+				+0.3
4,800,770	+				-1.1
4,800,771	-				+1.0
4,800,790	+				-2.0
4,800,790	+				-0.7
4,800,791	-				-0.7
4,800,791	-				-1.6
4,800,791	-				-1.7
4,800,840	+				-2.3
4,800,891	+				+1.0
4,800,895	-				-1.2
4,800,895	-				+0.0
4,800,905	-				-0.7
4,800,925	+				-1.0
4,800,926	-				-1.0
4,801,061	+				+0.5
4,801,062	-				-2.0
4,801,108	+	SusG	BT3698	0.11	+0.0
4,801,116	-	SusG	BT3698	0.12	-2.3
4,801,127	+	SusG	BT3698	0.12	-0.5
4,801,151	-	SusG	BT3698	0.13	-2.0
4,801,181	-	SusG	BT3698	0.15	-0.6
4,801,268	-	SusG	BT3698	0.19	-1.0
4,801,275	-	SusG	BT3698	0.19	-0.6
4,801,279	+	SusG	BT3698	0.20	-2.0
4,801,279	+	SusG	BT3698	0.20	+0.0
4,801,279	+	SusG	BT3698	0.20	-1.4
4,801,279	+	SusG	BT3698	0.20	-0.9
4,801,279	+	SusG	BT3698	0.20	-1.3
4,801,283	+	SusG	BT3698	0.20	+0.0
4,801,363	+	SusG	BT3698	0.24	-1.4
4,801,369	+	SusG	BT3698	0.24	-0.5
4,801,370	-	SusG	BT3698	0.24	-1.5
4,801,448	+	SusG	BT3698	0.28	-1.9
4,801,467	-	SusG	BT3698	0.29	-2.0
4,801,559	+	SusG	BT3698	0.33	-0.5
4,801,563	-	SusG	BT3698	0.33	-1.2
4,801,624	+	SusG	BT3698	0.36	-0.8
4,801,628	-	SusG	BT3698	0.36	-1.2
4,801,635	+	SusG	BT3698	0.37	-3.0
4,801,635	+	SusG	BT3698	0.37	-2.7
4,801,635	+	SusG	BT3698	0.37	+0.3
4,801,636	-	SusG	BT3698	0.37	-0.1
4,801,636	-	SusG	BT3698	0.37	-1.0
4,801,670	+	SusG	BT3698	0.38	-1.2
4,801,671	-	SusG	BT3698	0.38	-0.6
4,801,672	+	SusG	BT3698	0.38	-2.3
4,801,672	+	SusG	BT3698	0.38	-0.5
4,801,672	+	SusG	BT3698	0.38	-0.6
4,801,672	+	SusG	BT3698	0.38	-1.5
4,801,673	-	SusG	BT3698	0.38	-1.0
4,801,686	-	SusG	BT3698	0.39	-1.4
4,801,703	-	SusG	BT3698	0.40	-0.7
4,801,706	-	SusG	BT3698	0.40	-2.3
4,801,715	+	SusG	BT3698	0.41	-1.3
4,801,716	-	SusG	BT3698	0.41	-0.5
4,801,771	+	SusG	BT3698	0.43	-1.6
4,801,888	+	SusG	BT3698	0.49	-1.6
4,801,889	-	SusG	BT3698	0.49	-0.4
4,801,893	-	SusG	BT3698	0.49	+0.0
4,801,933	+	SusG	BT3698	0.51	-1.2
4,801,934	-	SusG	BT3698	0.51	-1.5
4,802,072	+	SusG	BT3698	0.58	+0.0
4,802,170	+	SusG	BT3698	0.62	-1.0
4,802,174	-				-0.9
4,802,180	-	SusG	BT3698	0.63	-0.7
4,802,279	+	SusG	BT3698	0.68	-0.8
4,802,422	+	SusG	BT3698	0.75	-2.8
4,802,426	-	SusG	BT3698	0.75	-0.3
4,802,457	-	SusG	BT3698	0.76	-1.0
4,802,499	+	SusG	BT3698	0.78	+1.0
4,802,499	+	SusG	BT3698	0.78	-1.0
4,802,512	+	SusG	BT3698	0.79	-1.6
4,802,543	+	SusG	BT3698	0.80	+1.6
4,802,597	-	SusG	BT3698	0.83	-0.7
4,802,627	+	SusG	BT3698	0.84	-0.8
4,802,746	+				+0.0
4,802,754	+				-3.3
4,802,811	-				-0.8
4,802,962	+				-2.2
4,802,963	-				+0.0
4,802,974	+				-1.8
4,803,019	-				-2.6
4,803,057	-				+1.3
4,803,057	-				-1.5
4,803,059	+				+0.0
4,803,059	+				-1.0
4,803,160	+				-1.4
4,803,161	-				+0.0
4,803,238	+	SusF	BT3699	0.12	+0.0
4,803,238	+				-1.0
4,803,301	-	SusF	BT3699	0.16	-0.6
4,803,301	-	SusF	BT3699	0.16	+0.0
4,803,316	+	SusF	BT3699	0.17	-1.0
4,803,317	-	SusF	BT3699	0.18	-2.3
4,803,341	+	SusF	BT3699	0.19	-2.3
4,803,341	+	SusF	BT3699	0.19	+1.0
4,803,341	+	SusF	BT3699	0.19	-1.5
4,803,364	+	SusF	BT3699	0.21	-0.7
4,803,365	-	SusF	BT3699	0.21	-1.0
4,803,416	+	SusF	BT3699	0.24	+0.0
4,803,421	+	SusF	BT3699	0.25	-0.9
4,803,422	-	SusF	BT3699	0.25	+0.4
4,803,438	+	SusF	BT3699	0.26	+0.0
4,803,501	+	SusF	BT3699	0.30	-1.3
4,803,501	+	SusF	BT3699	0.30	-1.6
4,803,771	+	SusF	BT3699	0.49	+0.0
4,803,829	+	SusF	BT3699	0.53	-2.2
4,803,834	+	SusF	BT3699	0.53	+0.0
4,803,835	-	SusF	BT3699	0.53	-1.0
4,803,860	-	SusF	BT3699	0.55	-2.2
4,803,876	+	SusF	BT3699	0.56	-0.9
4,803,935	+	SusF	BT3699	0.60	-1.4
4,803,936	-	SusF	BT3699	0.60	-1.0