Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3567

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
4,615,697	-		BT3566	0.38	-1.8
4,615,697	-		BT3566	0.38	-1.1
4,615,697	-		BT3566	0.38	-1.1
4,615,766	+		BT3566	0.43	-0.0
4,615,858	+		BT3566	0.50	-0.5
4,615,858	+		BT3566	0.50	-1.6
4,615,858	+		BT3566	0.50	-2.0
4,615,859	-		BT3566	0.50	-1.1
4,615,859	-		BT3566	0.50	-0.3
4,615,862	+		BT3566	0.50	+1.0
4,615,888	-		BT3566	0.52	-3.2
4,615,913	-		BT3566	0.54	+0.7
4,615,913	-		BT3566	0.54	-3.6
4,615,913	-		BT3566	0.54	-1.5
4,615,935	+		BT3566	0.56	-1.2
4,615,987	-		BT3566	0.60	-2.0
4,616,038	+		BT3566	0.63	+1.0
4,616,039	-		BT3566	0.63	-0.8
4,616,039	-		BT3566	0.63	-0.6
4,616,042	-		BT3566	0.64	-1.2
4,616,086	-		BT3566	0.67	-1.8
4,616,301	+		BT3566	0.83	-1.5
4,616,389	+		BT3566	0.89	-1.1
4,616,496	+				-0.8
4,616,516	+				-0.0
4,616,519	-				-0.0
4,616,615	+				-1.3
4,616,647	+				-1.8
4,616,738	+				-4.0
4,616,754	+				-3.0
4,616,764	-				-1.0
4,616,889	+				-6.2
4,616,890	-				-3.7
4,616,890	-				-2.0
4,616,974	+		BT3567	0.14	-3.8
4,616,975	-		BT3567	0.14	-1.0
4,617,010	+		BT3567	0.15	-3.9
4,617,013	+		BT3567	0.15	-4.5
4,617,015	+		BT3567	0.15	-1.0
4,617,016	-		BT3567	0.15	-5.6
4,617,066	+		BT3567	0.18	-2.3
4,617,125	-		BT3567	0.20	-1.0
4,617,125	-		BT3567	0.20	-0.0
4,617,132	+		BT3567	0.20	-4.5
4,617,135	+		BT3567	0.21	-4.3
4,617,252	-		BT3567	0.26	-2.6
4,617,315	-		BT3567	0.28	-1.8
4,617,315	-				-1.6
4,617,318	-		BT3567	0.28	-0.0
4,617,448	+		BT3567	0.34	-2.6
4,617,449	-		BT3567	0.34	-3.0
4,617,518	+		BT3567	0.37	-1.0
4,617,590	+		BT3567	0.40	-1.0
4,617,591	-		BT3567	0.40	-3.3
4,617,632	+		BT3567	0.42	-2.3
4,617,665	+		BT3567	0.43	-2.8
4,617,666	-		BT3567	0.43	-3.5
4,617,677	-		BT3567	0.44	-3.5
4,617,797	+		BT3567	0.49	-2.3
4,617,860	-		BT3567	0.52	-3.2
4,617,889	-		BT3567	0.53	-3.0
4,617,894	+		BT3567	0.53	-2.6
4,617,969	+		BT3567	0.57	-6.2
4,618,117	-		BT3567	0.63	-2.0
4,618,160	+		BT3567	0.65	-1.6
4,618,161	-		BT3567	0.65	-4.5
4,618,226	+		BT3567	0.68	-0.0
4,618,227	-		BT3567	0.68	-2.3
4,618,235	+		BT3567	0.68	-2.0
4,618,270	+		BT3567	0.70	-2.6
4,618,270	+		BT3567	0.70	-1.0
4,618,273	-		BT3567	0.70	-1.6
4,618,273	-		BT3567	0.70	-3.6
4,618,304	+		BT3567	0.71	-3.3
4,618,305	-		BT3567	0.71	-0.0
4,618,359	-		BT3567	0.73	-6.2
4,618,574	+		BT3567	0.83	-1.0
4,618,688	+		BT3567	0.88	-2.3
4,618,972	-				-7.0
4,618,976	-				-5.7
4,619,003	+				-2.8
4,619,030	+				-2.3
4,619,096	+				-4.0
4,619,097	-				-1.6
4,619,248	+		BT3568	0.16	-5.1
4,619,249	-		BT3568	0.16	-2.9
4,619,249	-		BT3568	0.16	-0.0
4,619,255	-		BT3568	0.16	-0.0
4,619,293	-		BT3568	0.19	-3.2
4,619,352	-		BT3568	0.23	-2.6
4,619,449	-		BT3568	0.29	-3.8
4,619,621	+		BT3568	0.40	-1.0
4,619,727	-		BT3568	0.47	-2.0
4,619,728	+		BT3568	0.47	-1.6
4,619,772	+		BT3568	0.50	-4.0
4,619,791	-		BT3568	0.51	-0.0
4,619,791	-		BT3568	0.51	-0.0
4,619,792	+		BT3568	0.51	-2.7
4,619,806	+		BT3568	0.52	-3.3
4,619,826	+		BT3568	0.54	-4.8
4,619,826	+				-0.0
4,619,854	+		BT3568	0.55	-5.9
4,619,855	-		BT3568	0.55	-1.0
4,619,856	+		BT3568	0.56	-2.3
4,619,857	-		BT3568	0.56	-3.3
4,619,908	-		BT3568	0.59	-4.6