Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2411

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
3,010,424	+				-0.8
3,010,425	-				-0.0
3,010,426	+				-0.9
3,010,426	+				-1.7
3,010,426	+				-1.2
3,010,570	+				-1.4
3,010,592	+				-2.0
3,010,592	+				-1.0
3,010,594	+				-0.3
3,010,596	+				-1.0
3,010,615	+				-1.0
3,010,616	-				-1.7
3,010,748	+				-0.7
3,010,751	-				-1.6
3,010,751	-				-3.3
3,010,754	-				+0.6
3,010,896	+		BT2410	0.15	-0.7
3,010,909	+		BT2410	0.17	-2.6
3,010,909	+		BT2410	0.17	-1.3
3,010,919	-		BT2410	0.20	-1.3
3,011,082	+		BT2410	0.53	-2.0
3,011,124	-		BT2410	0.61	-1.6
3,011,143	+		BT2410	0.65	-0.8
3,011,169	-		BT2410	0.70	-1.0
3,011,253	+		BT2410	0.87	-1.5
3,011,254	-		BT2410	0.88	-0.6
3,011,254	-		BT2410	0.88	-0.0
3,011,259	+		BT2410	0.89	-0.4
3,011,348	+				-0.3
3,011,428	+				-1.0
3,011,433	-				-1.2
3,011,433	-				-0.0
3,011,433	-				-1.6
3,011,433	-				+1.0
3,011,433	-				-1.3
3,011,434	+				-1.2
3,011,435	-				-2.0
3,011,441	+				-0.1
3,011,504	-		BT2411	0.14	-1.1
3,011,507	+		BT2411	0.15	-0.5
3,011,508	-		BT2411	0.15	-1.5
3,011,508	-		BT2411	0.15	-0.8
3,011,508	-		BT2411	0.15	-1.7
3,011,711	-		BT2411	0.34	-0.2
3,011,772	-		BT2411	0.40	-1.0
3,011,813	+		BT2411	0.44	+0.6
3,011,813	+		BT2411	0.44	-0.7
3,011,813	+		BT2411	0.44	-0.0
3,011,813	+		BT2411	0.44	-1.0
3,011,813	+		BT2411	0.44	-1.0
3,011,813	+		BT2411	0.44	-1.4
3,011,866	+		BT2411	0.49	-0.0
3,011,988	+		BT2411	0.61	-1.0
3,012,012	-		BT2411	0.63	-0.6
3,012,092	+		BT2411	0.71	-2.0
3,012,092	+		BT2411	0.71	-1.3
3,012,095	-		BT2411	0.71	-1.3
3,012,095	-		BT2411	0.71	+0.2
3,012,106	+		BT2411	0.73	-1.4
3,012,107	-		BT2411	0.73	-0.6
3,012,107	-		BT2411	0.73	-1.4
3,012,153	+		BT2411	0.77	-0.6
3,012,177	-		BT2411	0.79	-2.0
3,012,179	-		BT2411	0.80	-2.3
3,012,255	-		BT2411	0.87	-2.5
3,012,255	-		BT2411	0.87	+0.2
3,012,330	-				-1.2
3,012,330	-				-2.2
3,012,366	-				-0.0
3,012,469	-				-0.9
3,012,472	-				+0.4
3,012,472	-				-1.6
3,012,484	-				-0.0
3,012,526	+				-1.1
3,012,586	-		BT2412	0.11	-0.0
3,012,660	+		BT2412	0.15	-1.2
3,012,664	+		BT2412	0.15	-0.0
3,012,665	-		BT2412	0.15	-3.2
3,012,665	-		BT2412	0.15	-1.1
3,012,730	+		BT2412	0.19	-1.2
3,012,859	+		BT2412	0.26	+1.0
3,012,932	-		BT2412	0.30	+0.4
3,012,996	-		BT2412	0.33	-1.1
3,013,037	+		BT2412	0.36	-1.7
3,013,037	+		BT2412	0.36	+1.0
3,013,171	+		BT2412	0.43	-1.0
3,013,249	+		BT2412	0.47	-1.0
3,013,249	+		BT2412	0.47	-0.9