Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2171

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
2,729,461	-		BT2169	0.50	-3.1
2,729,662	+		BT2169	0.87	-0.1
2,729,683	+				-0.6
2,729,683	+				-0.5
2,729,683	+				-1.1
2,729,770	+				-1.1
2,729,825	+				-1.4
2,729,879	-				-1.4
2,729,910	+				-1.1
2,729,958	-		BT2170	0.21	-1.8
2,729,963	-		BT2170	0.22	-1.3
2,729,970	-		BT2170	0.24	-2.7
2,729,970	-		BT2170	0.24	-2.7
2,729,970	-		BT2170	0.24	-2.1
2,730,125	-		BT2170	0.59	-1.1
2,730,192	+		BT2170	0.75	-0.4
2,730,192	+		BT2170	0.75	-2.4
2,730,195	-		BT2170	0.75	-0.6
2,730,211	-		BT2170	0.79	-3.3
2,730,235	-		BT2170	0.85	-5.1
2,730,235	-		BT2170	0.85	-1.9
2,730,267	+				-3.1
2,730,267	+				+0.5
2,730,268	-				-2.4
2,730,316	-				-2.4
2,730,332	+				-1.1
2,730,357	+				-1.5
2,730,498	+		BT2171	0.20	-1.6
2,730,531	-		BT2171	0.23	-2.6
2,730,536	+		BT2171	0.24	+0.3
2,730,537	-		BT2171	0.24	-1.8
2,730,537	-		BT2171	0.24	+0.4
2,730,621	+		BT2171	0.34	-0.1
2,730,622	-		BT2171	0.34	-1.1
2,730,630	-		BT2171	0.35	-3.5
2,730,630	-		BT2171	0.35	-0.1
2,730,699	-		BT2171	0.43	-1.1
2,730,709	-		BT2171	0.44	-0.1
2,730,712	+		BT2171	0.44	-0.8
2,730,713	-		BT2171	0.44	-1.6
2,730,734	-		BT2171	0.47	-2.1
2,730,765	+		BT2171	0.50	-1.1
2,730,794	+		BT2171	0.54	-1.4
2,730,825	+		BT2171	0.57	-1.5
2,730,868	-		BT2171	0.62	-0.6
2,730,900	+		BT2171	0.66	-2.1
2,730,902	+		BT2171	0.66	-2.2
2,730,902	+				-1.1
2,730,902	+		BT2171	0.66	-1.2
2,730,902	+		BT2171	0.66	-1.6
2,730,903	-		BT2171	0.66	-2.4
2,730,903	-		BT2171	0.66	-0.1
2,730,936	+		BT2171	0.70	-0.7
2,731,131	+				-0.8
2,731,138	+				-0.9
2,731,180	+				-1.3
2,731,181	-				-3.1
2,731,183	+				-0.9
2,731,201	+				-2.5
2,731,202	-				-1.9
2,731,212	+				-0.1
2,731,254	-				-2.8
2,731,257	+				-1.9
2,731,257	+				-2.2
2,731,387	+				-1.1
2,731,454	+				-0.1
2,731,454	+				-0.4
2,731,454	+				-1.1
2,731,467	-				-2.4
2,731,507	+		BT2172	0.11	+0.5
2,731,614	+		BT2172	0.15	-0.1
2,731,644	+		BT2172	0.16	-1.2
2,731,647	+		BT2172	0.16	-1.6
2,731,666	+		BT2172	0.17	-1.1
2,731,671	+		BT2172	0.17	-2.4
2,731,711	+		BT2172	0.19	-2.2
2,731,722	+		BT2172	0.19	-1.6
2,731,722	+		BT2172	0.19	+0.5
2,731,722	+		BT2172	0.19	-1.9
2,731,821	+		BT2172	0.23	-3.5
2,731,821	+		BT2172	0.23	-1.6
2,731,890	+		BT2172	0.25	-2.3
2,731,899	+		BT2172	0.26	-3.2
2,731,900	-		BT2172	0.26	-1.1
2,731,937	+		BT2172	0.27	-1.1
2,731,949	+		BT2172	0.28	-3.1
2,731,981	+		BT2172	0.29	-1.1
2,731,982	-		BT2172	0.29	-1.6
2,731,982	-		BT2172	0.29	-2.9
2,731,982	-		BT2172	0.29	-2.6
2,731,983	+		BT2172	0.29	-1.1
2,731,984	-		BT2172	0.29	-0.1
2,731,985	+		BT2172	0.29	-0.1
2,731,986	-		BT2172	0.29	-0.1
2,731,986	-		BT2172	0.29	+0.5
2,731,986	-		BT2172	0.29	-2.1
2,731,986	-		BT2172	0.29	-0.1
2,732,038	+		BT2172	0.31	-2.1
2,732,039	-		BT2172	0.31	+0.9
2,732,040	+		BT2172	0.31	-0.6
2,732,045	+		BT2172	0.31	-0.1
2,732,053	-		BT2172	0.32	-0.1