Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1273

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
1,581,905	+		BT1272	0.13	-1.6
1,581,916	+		BT1272	0.14	-2.0
1,582,003	+		BT1272	0.23	-0.6
1,582,004	-		BT1272	0.23	-2.0
1,582,004	-		BT1272	0.23	-2.0
1,582,048	+		BT1272	0.28	+1.0
1,582,113	-		BT1272	0.34	+0.0
1,582,133	-		BT1272	0.36	-0.4
1,582,135	-		BT1272	0.36	-2.4
1,582,189	+		BT1272	0.42	-1.0
1,582,189	+		BT1272	0.42	-0.6
1,582,190	-		BT1272	0.42	+0.0
1,582,257	-		BT1272	0.49	-0.8
1,582,294	+		BT1272	0.52	-1.0
1,582,369	+		BT1272	0.60	+2.6
1,582,516	+		BT1272	0.75	-1.0
1,582,541	+		BT1272	0.77	+0.0
1,582,730	-				-1.3
1,582,992	-				+0.6
1,582,998	+				-0.2
1,582,998	+				-2.0
1,582,999	-				+1.0
1,583,014	-				-1.8
1,583,014	-				-1.6
1,583,014	-				-0.2
1,583,080	-		BT1273	0.14	-0.6
1,583,108	-		BT1273	0.15	-1.6
1,583,281	-		BT1273	0.25	+0.0
1,583,362	+		BT1273	0.29	+0.0
1,583,363	-		BT1273	0.29	-1.0
1,583,382	-		BT1273	0.31	-0.8
1,583,382	-		BT1273	0.31	-0.1
1,583,382	-		BT1273	0.31	+0.0
1,583,382	-		BT1273	0.31	-0.2
1,583,493	+		BT1273	0.37	-2.0
1,583,493	+		BT1273	0.37	-1.2
1,583,497	+		BT1273	0.37	-1.0
1,583,497	+		BT1273	0.37	+1.0
1,583,873	+		BT1273	0.58	-0.4
1,583,931	+		BT1273	0.61	+1.0
1,584,000	+		BT1273	0.65	-2.2
1,584,217	-		BT1273	0.78	-1.0
1,584,219	+		BT1273	0.78	+1.0
1,584,394	+		BT1273	0.88	-1.7
1,584,439	+				+0.0
1,584,439	+				-1.6
1,584,509	+				-1.6
1,584,509	+				+0.0
1,584,510	-				-1.0
1,584,588	+				+1.3
1,584,604	-				-1.0
1,584,666	+				-1.0
1,584,699	+				-2.3
1,584,700	-				+0.0
1,584,712	-				-1.6
1,584,725	-				-1.3
1,584,899	-		BT1274	0.27	+1.0
1,584,902	-		BT1274	0.28	-1.1
1,584,941	-		BT1274	0.34	-1.6
1,584,987	+		BT1274	0.41	+0.0
1,584,988	-		BT1274	0.41	-1.0
1,584,993	+		BT1274	0.42	-1.6
1,585,108	-		BT1274	0.60	-2.0
1,585,210	-		BT1274	0.76	+0.0
1,585,236	-		BT1274	0.80	-1.0
1,585,246	+		BT1274	0.82	-1.0
1,585,275	+		BT1274	0.86	+0.0
1,585,361	+				-2.0
1,585,376	-				+0.0
1,585,403	+				-1.0
1,585,486	-				-0.4
1,585,558	+		BT1275	0.13	-1.0