Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2276

Experiment: D-Xylose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose 2.5 mg/ml (C)
2,855,360	-		BT2274	0.77	-1.0
2,855,399	-		BT2274	0.83	+1.3
2,855,455	-				-0.8
2,855,494	-				-1.0
2,855,532	-				-1.6
2,855,532	-				+1.3
2,855,535	-				-2.0
2,855,566	-				-1.1
2,855,599	+				+0.0
2,855,632	-				-1.6
2,855,632	-				-0.5
2,855,663	+				+1.0
2,855,685	-				+0.0
2,855,799	-		BT2275	0.23	-1.3
2,855,805	-		BT2275	0.24	-1.0
2,855,979	-		BT2275	0.53	-2.1
2,856,071	+		BT2275	0.69	+0.0
2,856,071	+		BT2275	0.69	-1.1
2,856,072	-		BT2275	0.69	-0.7
2,856,072	-		BT2275	0.69	-2.2
2,856,174	-		BT2275	0.86	-0.8
2,856,180	-		BT2275	0.87	-1.6
2,856,254	+				+0.0
2,856,254	+				+0.4
2,856,255	-				-1.6
2,856,256	+				-0.9
2,856,268	-				-1.1
2,856,275	-				+1.0
2,856,277	-				-2.0
2,856,293	+				-1.4
2,856,309	+				+0.0
2,856,310	-				-0.2
2,856,348	-				-0.6
2,856,350	+				-1.6
2,856,350	+				-1.6
2,856,351	-				-1.6
2,856,351	-				-0.8
2,856,380	+				-1.6
2,856,383	+				-3.2
2,856,384	-				+0.0
2,856,393	+		BT2276	0.10	-1.0
2,856,428	+		BT2276	0.13	-2.3
2,856,452	+		BT2276	0.15	+0.0
2,856,453	-		BT2276	0.16	-2.0
2,856,469	-		BT2276	0.17	+0.0
2,856,515	+		BT2276	0.21	+0.0
2,856,515	+		BT2276	0.21	+1.0
2,856,522	-		BT2276	0.22	+1.6
2,856,536	+		BT2276	0.23	-2.2
2,856,576	-		BT2276	0.26	-1.0
2,856,582	-		BT2276	0.27	-2.3
2,856,586	+		BT2276	0.27	-1.1
2,856,586	+		BT2276	0.27	-0.8
2,856,648	+		BT2276	0.33	-0.8
2,856,672	+		BT2276	0.35	-0.4
2,856,674	+		BT2276	0.35	+1.0
2,856,675	-		BT2276	0.35	-0.8
2,856,786	-		BT2276	0.45	+1.0
2,856,788	+		BT2276	0.45	+0.0
2,856,791	+		BT2276	0.45	+0.2
2,856,792	-		BT2276	0.45	+0.5
2,856,792	-		BT2276	0.45	-2.0
2,856,792	-		BT2276	0.45	+1.0
2,856,792	-		BT2276	0.45	-1.1
2,856,793	+		BT2276	0.46	+0.8
2,856,805	-		BT2276	0.47	-0.7
2,856,806	+		BT2276	0.47	-1.8
2,856,817	+		BT2276	0.48	-0.3
2,856,827	+		BT2276	0.49	-1.0
2,856,828	-		BT2276	0.49	+0.0
2,856,862	+		BT2276	0.52	-0.5
2,856,867	+		BT2276	0.52	+2.3
2,856,888	-		BT2276	0.54	-2.0
2,856,888	-		BT2276	0.54	-0.7
2,856,896	+		BT2276	0.55	+1.6
2,856,897	-		BT2276	0.55	+0.0
2,856,916	+		BT2276	0.56	+0.0
2,856,916	+		BT2276	0.56	-1.1
2,856,968	+		BT2276	0.61	-1.5
2,856,968	+		BT2276	0.61	-0.6
2,856,978	+		BT2276	0.62	-0.7
2,856,978	+		BT2276	0.62	-1.0
2,857,032	+		BT2276	0.67	-0.6
2,857,033	-		BT2276	0.67	-1.2
2,857,033	-		BT2276	0.67	-0.7
2,857,090	-		BT2276	0.72	-1.3
2,857,166	+		BT2276	0.78	+0.0
2,857,167	-		BT2276	0.78	-1.2
2,857,245	+		BT2276	0.85	+0.1
2,857,246	-		BT2276	0.85	+0.0
2,857,246	-		BT2276	0.85	-2.0
2,857,318	+				+0.5
2,857,702	-				-1.2
2,857,717	-				-1.0
2,857,762	-				-1.7
2,857,782	-				-3.2
2,857,822	-				-0.8
2,857,879	+				-1.2
2,857,880	-				-0.7
2,857,917	-				+0.0
2,857,980	-		BT2277	0.10	-1.1
2,857,980	-		BT2277	0.10	+1.0
2,858,070	+		BT2277	0.17	+0.0
2,858,090	+		BT2277	0.19	+0.0
2,858,113	+		BT2277	0.21	-1.0
2,858,234	-		BT2277	0.30	-1.5
2,858,307	-		BT2277	0.36	-0.4
2,858,327	-		BT2277	0.38	-1.3
2,858,389	+		BT2277	0.43	-0.2