Experiment: D-Xylose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0387 and BT0388 are separated by 24 nucleotides BT0388 and BT0389 are separated by 4 nucleotides BT0389 and BT0390 are separated by 4 nucleotides
BT0387: BT0387 - NADH dehydrogenase subunit 2 (NCBI ptt file), at 476,462 to 477,778
BT0387
BT0388: BT0388 - galactoside O-acetyltransferase (NCBI ptt file), at 477,803 to 478,426
BT0388
BT0389: BT0389 - putative galactoside acetyltransferase (NCBI ptt file), at 478,431 to 478,976
BT0389
BT0390: BT0390 - putative O-antigen export protein (NCBI ptt file), at 478,981 to 480,345
BT0390
Position (kb) 477
478
479 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 476.803 kb on - strand, within BT0387 at 476.803 kb on - strand, within BT0387 at 476.804 kb on + strand, within BT0387 at 476.881 kb on - strand, within BT0387 at 477.020 kb on - strand, within BT0387 at 477.087 kb on + strand, within BT0387 at 477.180 kb on - strand, within BT0387 at 477.314 kb on + strand, within BT0387 at 477.405 kb on + strand, within BT0387 at 477.444 kb on + strand, within BT0387 at 477.504 kb on + strand, within BT0387 at 477.610 kb on - strand, within BT0387 at 477.610 kb on - strand, within BT0387 at 477.650 kb on - strand at 477.712 kb on + strand at 477.712 kb on + strand at 477.736 kb on - strand at 477.777 kb on - strand at 477.849 kb on - strand at 477.865 kb on - strand at 477.955 kb on + strand, within BT0388 at 478.022 kb on - strand, within BT0388 at 478.078 kb on + strand, within BT0388 at 478.123 kb on - strand, within BT0388 at 478.135 kb on + strand, within BT0388 at 478.136 kb on - strand, within BT0388 at 478.280 kb on - strand, within BT0388 at 478.352 kb on - strand, within BT0388 at 478.354 kb on - strand, within BT0388 at 478.378 kb on + strand at 478.393 kb on - strand at 478.435 kb on + strand at 478.593 kb on - strand, within BT0389 at 478.672 kb on + strand, within BT0389 at 478.673 kb on - strand, within BT0389 at 478.730 kb on + strand, within BT0389 at 478.920 kb on - strand, within BT0389 at 479.103 kb on + strand at 479.103 kb on + strand at 479.196 kb on + strand, within BT0390 at 479.305 kb on - strand, within BT0390 at 479.378 kb on + strand, within BT0390
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose 2.5 mg/ml (C) remove 476,803 - BT0387 0.26 -0.9 476,803 - BT0387 0.26 -1.0 476,804 + BT0387 0.26 -1.5 476,881 - BT0387 0.32 +1.4 477,020 - BT0387 0.42 -0.7 477,087 + BT0387 0.47 +0.9 477,180 - BT0387 0.55 -0.7 477,314 + BT0387 0.65 +0.9 477,405 + BT0387 0.72 +0.4 477,444 + BT0387 0.75 -2.1 477,504 + BT0387 0.79 -0.1 477,610 - BT0387 0.87 -0.5 477,610 - BT0387 0.87 +0.4 477,650 - -1.7 477,712 + -3.6 477,712 + -1.1 477,736 - -2.1 477,777 - -1.6 477,849 - -1.1 477,865 - -1.2 477,955 + BT0388 0.24 +0.9 478,022 - BT0388 0.35 -2.0 478,078 + BT0388 0.44 -1.1 478,123 - BT0388 0.51 -2.1 478,135 + BT0388 0.53 -1.7 478,136 - BT0388 0.53 -1.9 478,280 - BT0388 0.76 -2.1 478,352 - BT0388 0.88 -2.3 478,354 - BT0388 0.88 -1.7 478,378 + +1.9 478,393 - -0.1 478,435 + -0.6 478,593 - BT0389 0.30 -1.3 478,672 + BT0389 0.44 +1.4 478,673 - BT0389 0.44 -1.3 478,730 + BT0389 0.55 -1.1 478,920 - BT0389 0.90 -0.1 479,103 + -1.9 479,103 + -0.1 479,196 + BT0390 0.16 -0.1 479,305 - BT0390 0.24 -1.7 479,378 + BT0390 0.29 -1.1
Or see this region's nucleotide sequence