Experiment: D-Glucose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0110 and BT0111 are separated by 167 nucleotides BT0111 and BT0112 overlap by 23 nucleotides BT0112 and BT0113 are separated by 25 nucleotides BT0113 and BT0114 are separated by 2 nucleotides
BT0110: BT0110 - putative regulatory protein (NCBI ptt file), at 102,836 to 103,696
BT0110
BT0111: BT0111 - hypothetical protein (NCBI ptt file), at 103,864 to 104,115
BT0111
BT0112: BT0112 - putative permease (NCBI ptt file), at 104,093 to 104,998
BT0112
BT0113: BT0113 - hypothetical protein (NCBI ptt file), at 105,024 to 105,524
BT0113
BT0114: BT0114 - putative symporter, arsenic resistance membrane protein (NCBI ptt file), at 105,527 to 106,573
BT0114
Position (kb) 104
105 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 103.143 kb on + strand, within BT0110 at 103.144 kb on - strand, within BT0110 at 103.171 kb on + strand, within BT0110 at 103.212 kb on + strand, within BT0110 at 103.326 kb on + strand, within BT0110 at 103.390 kb on - strand, within BT0110 at 103.519 kb on + strand, within BT0110 at 103.599 kb on - strand, within BT0110 at 103.605 kb on - strand, within BT0110 at 103.702 kb on - strand at 103.730 kb on - strand at 103.794 kb on + strand at 103.794 kb on + strand at 103.803 kb on + strand at 103.821 kb on + strand at 103.824 kb on + strand at 103.998 kb on + strand, within BT0111 at 104.004 kb on + strand, within BT0111 at 104.111 kb on + strand at 104.116 kb on - strand at 104.163 kb on - strand at 104.163 kb on - strand at 104.261 kb on - strand, within BT0112 at 104.293 kb on + strand, within BT0112 at 104.399 kb on - strand, within BT0112 at 104.401 kb on - strand, within BT0112 at 104.442 kb on + strand, within BT0112 at 104.444 kb on + strand, within BT0112 at 104.458 kb on + strand, within BT0112 at 104.477 kb on + strand, within BT0112 at 104.666 kb on - strand, within BT0112 at 104.690 kb on - strand, within BT0112 at 104.693 kb on + strand, within BT0112 at 104.695 kb on + strand, within BT0112 at 104.695 kb on + strand, within BT0112 at 104.723 kb on + strand, within BT0112 at 104.834 kb on + strand, within BT0112 at 104.893 kb on + strand, within BT0112 at 104.999 kb on - strand at 105.018 kb on + strand at 105.195 kb on + strand, within BT0113 at 105.367 kb on + strand, within BT0113 at 105.368 kb on - strand, within BT0113 at 105.383 kb on + strand, within BT0113 at 105.429 kb on + strand, within BT0113 at 105.432 kb on - strand, within BT0113 at 105.432 kb on - strand, within BT0113 at 105.453 kb on + strand, within BT0113 at 105.453 kb on + strand, within BT0113 at 105.460 kb on - strand, within BT0113 at 105.492 kb on + strand at 105.528 kb on + strand at 105.529 kb on - strand at 105.580 kb on + strand at 105.580 kb on + strand at 105.581 kb on - strand at 105.815 kb on - strand, within BT0114 at 105.818 kb on + strand, within BT0114 at 105.935 kb on + strand, within BT0114 at 105.935 kb on + strand, within BT0114 at 105.968 kb on + strand, within BT0114 at 105.971 kb on + strand, within BT0114
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 2.5 mg/ml (C) remove 103,143 + BT0110 0.36 -2.2 103,144 - BT0110 0.36 -0.6 103,171 + BT0110 0.39 -1.0 103,212 + BT0110 0.44 +0.4 103,326 + BT0110 0.57 +1.0 103,390 - BT0110 0.64 -1.3 103,519 + BT0110 0.79 -2.0 103,599 - BT0110 0.89 +0.0 103,605 - BT0110 0.89 -0.8 103,702 - -1.6 103,730 - -0.7 103,794 + +0.2 103,794 + -0.6 103,803 + -1.0 103,821 + -1.8 103,824 + -1.0 103,998 + BT0111 0.53 +0.0 104,004 + BT0111 0.56 -2.3 104,111 + -1.0 104,116 - +0.0 104,163 - -1.4 104,163 - -1.2 104,261 - BT0112 0.19 -2.0 104,293 + BT0112 0.22 -0.6 104,399 - BT0112 0.34 -1.0 104,401 - BT0112 0.34 +0.0 104,442 + BT0112 0.39 -1.0 104,444 + BT0112 0.39 -1.7 104,458 + BT0112 0.40 -1.6 104,477 + BT0112 0.42 -0.6 104,666 - BT0112 0.63 -1.0 104,690 - BT0112 0.66 -1.6 104,693 + BT0112 0.66 -2.7 104,695 + BT0112 0.66 -1.6 104,695 + BT0112 0.66 -1.6 104,723 + BT0112 0.70 -3.2 104,834 + BT0112 0.82 +1.0 104,893 + BT0112 0.88 -1.3 104,999 - -1.0 105,018 + -1.2 105,195 + BT0113 0.34 -2.0 105,367 + BT0113 0.68 -0.8 105,368 - BT0113 0.69 -2.0 105,383 + BT0113 0.72 +1.6 105,429 + BT0113 0.81 -0.4 105,432 - BT0113 0.81 -2.5 105,432 - BT0113 0.81 +1.0 105,453 + BT0113 0.86 -1.4 105,453 + BT0113 0.86 -1.0 105,460 - BT0113 0.87 -1.7 105,492 + -1.4 105,528 + -1.6 105,529 - -2.3 105,580 + -2.2 105,580 + -1.2 105,581 - -0.1 105,815 - BT0114 0.28 -1.0 105,818 + BT0114 0.28 -1.0 105,935 + BT0114 0.39 -1.4 105,935 + BT0114 0.39 +0.0 105,968 + BT0114 0.42 -2.6 105,971 + BT0114 0.42 +1.0
Or see this region's nucleotide sequence