Experiment: D-Glucose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT2829 and BT2830 are separated by 82 nucleotides BT2830 and BT2831 are separated by 215 nucleotides BT2831 and BT2832 overlap by 20 nucleotides BT2832 and BT2833 are separated by 3 nucleotides
BT2829: BT2829 - arginyl-tRNA synthetase (NCBI ptt file), at 3,527,081 to 3,528,874
BT2829
BT2830: BT2830 - DNA-binding protein HU-beta (NCBI ptt file), at 3,528,957 to 3,529,229
BT2830
BT2831: BT2831 - rhomboid family protein (NCBI ptt file), at 3,529,445 to 3,530,119
BT2831
BT2832: BT2832 - rhomboid family protein (NCBI ptt file), at 3,530,100 to 3,531,002
BT2832
BT2833: BT2833 - hypothetical protein (NCBI ptt file), at 3,531,006 to 3,532,091
BT2833
Position (kb)
3529
3530
3531 Strain fitness (log2 ratio)
-2
-1
0
1 at 3528.937 kb on - strand at 3528.950 kb on + strand at 3528.952 kb on + strand at 3528.953 kb on - strand at 3528.953 kb on - strand at 3528.953 kb on - strand at 3528.998 kb on + strand, within BT2830 at 3528.999 kb on - strand, within BT2830 at 3529.019 kb on + strand, within BT2830 at 3529.019 kb on + strand, within BT2830 at 3529.025 kb on + strand, within BT2830 at 3529.025 kb on + strand, within BT2830 at 3529.025 kb on + strand, within BT2830 at 3529.026 kb on - strand, within BT2830 at 3529.026 kb on - strand, within BT2830 at 3529.026 kb on - strand, within BT2830 at 3529.026 kb on - strand, within BT2830 at 3529.105 kb on - strand, within BT2830 at 3529.124 kb on + strand, within BT2830 at 3529.124 kb on + strand, within BT2830 at 3529.131 kb on - strand, within BT2830 at 3529.208 kb on + strand at 3529.249 kb on + strand at 3529.249 kb on + strand at 3529.252 kb on + strand at 3529.252 kb on + strand at 3529.254 kb on + strand at 3529.254 kb on + strand at 3529.255 kb on - strand at 3529.256 kb on + strand at 3529.256 kb on + strand at 3529.257 kb on - strand at 3529.257 kb on - strand at 3529.262 kb on - strand at 3529.295 kb on - strand at 3529.386 kb on + strand at 3530.047 kb on + strand, within BT2831 at 3530.071 kb on + strand at 3530.071 kb on + strand at 3530.075 kb on + strand at 3531.064 kb on + strand at 3531.064 kb on + strand at 3531.087 kb on + strand at 3531.087 kb on + strand at 3531.087 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 2.5 mg/ml (C) remove 3,528,937 - -0.1 3,528,950 + -2.2 3,528,952 + +0.9 3,528,953 - -0.1 3,528,953 - -1.1 3,528,953 - -1.1 3,528,998 + BT2830 0.15 -0.1 3,528,999 - BT2830 0.15 -0.9 3,529,019 + BT2830 0.23 -1.1 3,529,019 + BT2830 0.23 -0.5 3,529,025 + BT2830 0.25 -1.1 3,529,025 + BT2830 0.25 -0.5 3,529,025 + BT2830 0.25 -0.6 3,529,026 - BT2830 0.25 -0.1 3,529,026 - BT2830 0.25 -1.6 3,529,026 - BT2830 0.25 +0.5 3,529,026 - BT2830 0.25 -1.4 3,529,105 - BT2830 0.54 -0.8 3,529,124 + BT2830 0.61 -0.1 3,529,124 + BT2830 0.61 -0.1 3,529,131 - BT2830 0.64 -0.5 3,529,208 + +0.5 3,529,249 + -0.3 3,529,249 + -1.4 3,529,252 + -0.1 3,529,252 + +0.8 3,529,254 + -1.6 3,529,254 + -0.6 3,529,255 - -1.0 3,529,256 + -1.4 3,529,256 + -0.1 3,529,257 - -1.2 3,529,257 - +0.9 3,529,262 - -2.1 3,529,295 - -1.9 3,529,386 + -0.6 3,530,047 + BT2831 0.89 -0.5 3,530,071 + -1.1 3,530,071 + -0.1 3,530,075 + -1.4 3,531,064 + -2.1 3,531,064 + +1.3 3,531,087 + -2.1 3,531,087 + -1.1 3,531,087 + -1.6
Or see this region's nucleotide sequence