Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3638

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
4,713,381	+		BT3637	0.54	+0.2
4,713,381	+		BT3637	0.54	-2.5
4,713,381	+		BT3637	0.54	+0.0
4,713,382	-		BT3637	0.54	+2.0
4,713,382	-		BT3637	0.54	-1.3
4,713,383	+		BT3637	0.54	-1.9
4,713,383	+		BT3637	0.54	-2.0
4,713,384	-		BT3637	0.54	+0.0
4,713,461	+		BT3637	0.59	-2.6
4,713,495	+		BT3637	0.61	-1.1
4,713,501	-		BT3637	0.61	-0.5
4,713,527	+		BT3637	0.63	-0.9
4,713,566	+		BT3637	0.65	-1.3
4,713,566	+		BT3637	0.65	-2.0
4,713,662	+		BT3637	0.70	-1.7
4,713,663	-		BT3637	0.71	-0.3
4,713,673	+		BT3637	0.71	+0.0
4,713,755	+		BT3637	0.76	-1.0
4,713,806	-		BT3637	0.79	-1.6
4,713,809	+		BT3637	0.79	-0.6
4,713,831	+		BT3637	0.80	-0.6
4,713,841	+		BT3637	0.81	+1.0
4,713,913	+		BT3637	0.85	-1.6
4,713,942	-		BT3637	0.87	-1.6
4,713,992	+		BT3637	0.89	-1.3
4,714,001	-		BT3637	0.90	-1.6
4,714,001	-		BT3637	0.90	+0.0
4,714,057	-				-1.0
4,714,115	-				-0.9
4,714,267	+				-2.8
4,714,268	-				-0.4
4,714,272	-				-1.6
4,714,291	-				+1.0
4,714,291	-				-1.0
4,714,359	+				+0.0
4,714,359	+				+0.0
4,714,479	+				-1.7
4,714,582	+		BT3638	0.10	+0.0
4,714,582	+		BT3638	0.10	+1.6
4,714,582	+		BT3638	0.10	-1.0
4,714,584	+		BT3638	0.10	-1.0
4,714,665	+		BT3638	0.14	-0.8
4,714,692	+		BT3638	0.16	-1.3
4,714,704	+		BT3638	0.16	+2.0
4,714,752	+		BT3638	0.18	-0.7
4,714,756	+		BT3638	0.19	-2.0
4,714,756	+		BT3638	0.19	-2.4
4,714,785	+		BT3638	0.20	-0.6
4,714,851	+		BT3638	0.23	+0.0
4,715,011	+		BT3638	0.30	+0.2
4,715,294	+		BT3638	0.44	-1.2
4,715,341	+		BT3638	0.46	-1.0
4,715,346	+		BT3638	0.46	-1.0
4,715,474	+		BT3638	0.52	-0.6
4,715,718	+		BT3638	0.64	-2.0
4,715,727	+		BT3638	0.64	-0.5
4,715,727	+		BT3638	0.64	-1.1
4,715,727	+		BT3638	0.64	-0.8
4,715,855	+		BT3638	0.70	-2.6
4,715,859	+		BT3638	0.70	-0.4
4,715,880	+		BT3638	0.71	-2.5
4,716,009	+		BT3638	0.77	-1.0
4,716,253	+		BT3638	0.89	+1.6
4,716,253	+		BT3638	0.89	+1.0
4,716,574	+		BT3639	0.11	-1.0
4,716,655	+		BT3639	0.22	-0.7
4,716,917	+		BT3639	0.59	-2.8
4,716,996	+		BT3639	0.70	-1.7
4,717,157	+				-1.0
4,717,199	+				-2.2
4,717,217	+				-1.4