Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3254

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
4,152,705	-		BT3253	0.42	-1.0
4,152,907	-		BT3253	0.58	-1.0
4,152,907	-		BT3253	0.58	-1.5
4,153,238	-		BT3253	0.84	-3.7
4,153,238	-		BT3253	0.84	-2.8
4,153,508	-				-0.8
4,153,508	-				-0.7
4,153,510	-				-1.1
4,153,560	-				-1.5
4,153,578	-				+0.0
4,153,604	-				-0.5
4,153,632	-				+0.5
4,153,632	-				-1.3
4,153,857	-		BT3254	0.16	-1.0
4,153,938	-		BT3254	0.19	+1.6
4,153,942	-		BT3254	0.19	-1.5
4,154,075	-		BT3254	0.26	-1.6
4,154,075	-		BT3254	0.26	-1.0
4,154,095	-		BT3254	0.26	+0.0
4,154,095	-		BT3254	0.26	+0.6
4,154,095	-		BT3254	0.26	-1.0
4,154,095	-		BT3254	0.26	+0.6
4,154,099	-		BT3254	0.27	-1.4
4,154,099	-		BT3254	0.27	-1.0
4,154,224	-		BT3254	0.32	+2.0
4,154,229	-		BT3254	0.33	-1.3
4,154,258	-		BT3254	0.34	+0.6
4,154,296	-		BT3254	0.36	-1.4
4,154,501	-		BT3254	0.45	-0.6
4,154,520	-		BT3254	0.46	-0.1
4,154,614	-		BT3254	0.50	-1.1
4,154,682	-		BT3254	0.53	+0.2
4,154,688	-		BT3254	0.53	-2.8
4,154,696	-		BT3254	0.54	+0.0
4,154,696	-		BT3254	0.54	-3.1
4,154,719	-		BT3254	0.55	+0.0
4,154,751	-		BT3254	0.56	-2.3
4,154,776	-		BT3254	0.57	+3.0
4,154,776	-		BT3254	0.57	+0.0
4,154,923	-		BT3254	0.64	-3.0
4,155,048	-		BT3254	0.70	-1.0
4,155,076	-		BT3254	0.71	-2.0
4,155,253	-		BT3254	0.79	-2.5
4,155,346	-		BT3254	0.83	+0.0
4,155,530	-				-3.6
4,155,650	-				-1.0
4,155,650	-				-2.0
4,155,707	-				+0.0
4,155,792	-				-1.0
4,155,808	-				-2.0
4,155,825	-				+1.0
4,155,839	-				-2.3
4,155,860	-				-1.3
4,155,862	-				-1.9
4,155,907	-				-0.4
4,155,907	-				+0.0
4,155,911	-				-1.3
4,155,948	-				-0.5
4,156,041	-				+0.5
4,156,199	-		BT3255	0.19	-0.3
4,156,199	-		BT3255	0.19	-1.0
4,156,257	-		BT3255	0.23	-1.5
4,156,280	-		BT3255	0.24	-0.2
4,156,575	-		BT3255	0.44	-1.5
4,156,575	-		BT3255	0.44	-3.0
4,156,578	-		BT3255	0.45	-1.3
4,156,616	-		BT3255	0.47	-0.3
4,156,624	-		BT3255	0.48	-1.0