Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2479

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
3,100,155	+		BT2478	0.46	-0.6
3,100,199	+		BT2478	0.49	-3.0
3,100,218	+		BT2478	0.51	-3.3
3,100,218	+		BT2478	0.51	+1.0
3,100,218	+		BT2478	0.51	-1.3
3,100,219	-		BT2478	0.51	-0.3
3,100,358	+		BT2478	0.60	-3.0
3,100,368	-		BT2478	0.61	-1.6
3,100,397	+		BT2478	0.63	-2.0
3,100,398	-		BT2478	0.63	-0.6
3,100,430	+		BT2478	0.65	-2.0
3,100,434	+		BT2478	0.66	-0.7
3,100,472	+		BT2478	0.68	-0.0
3,100,472	+		BT2478	0.68	-0.0
3,100,472	+		BT2478	0.68	-0.0
3,100,536	+		BT2478	0.73	-2.0
3,100,536	+		BT2478	0.73	-1.7
3,100,548	+		BT2478	0.74	-0.5
3,100,593	+		BT2478	0.77	-0.0
3,100,593	+		BT2478	0.77	-1.6
3,100,594	-		BT2478	0.77	-0.9
3,100,602	+		BT2478	0.77	-0.0
3,100,603	-		BT2478	0.77	-1.6
3,100,626	+		BT2478	0.79	-3.8
3,100,637	+		BT2478	0.80	-0.4
3,100,680	+		BT2478	0.83	-1.5
3,100,680	+		BT2478	0.83	-1.1
3,100,692	+		BT2478	0.84	-0.3
3,100,692	+		BT2478	0.84	-0.0
3,100,734	-		BT2478	0.87	-0.8
3,100,766	+		BT2478	0.89	+0.6
3,100,772	+		BT2478	0.89	-0.7
3,100,773	-		BT2478	0.89	-0.0
3,100,795	-				-1.0
3,100,834	+				-0.6
3,100,834	+				-0.7
3,100,834	+				-1.0
3,100,956	+				-0.0
3,100,956	+				-0.9
3,100,956	+				-1.0
3,100,960	+				-2.8
3,100,960	+				-0.0
3,100,968	-				-0.8
3,101,003	+				-0.0
3,101,110	+				-1.0
3,101,158	+				-0.0
3,101,208	+		BT2479	0.14	-1.1
3,101,430	+		BT2479	0.34	+1.0
3,101,433	+		BT2479	0.34	-1.1
3,101,433	+		BT2479	0.34	-1.6
3,101,433	+		BT2479	0.34	-0.3
3,101,439	+		BT2479	0.34	+1.0
3,101,480	+		BT2479	0.38	+0.7
3,101,481	-		BT2479	0.38	-1.0
3,101,486	+		BT2479	0.39	-1.8
3,101,486	+		BT2479	0.39	-1.1
3,101,486	+		BT2479	0.39	+0.3
3,101,486	+		BT2479	0.39	-0.0
3,101,487	-		BT2479	0.39	-1.6
3,101,495	+		BT2479	0.39	+0.3
3,101,520	+		BT2479	0.42	+1.0
3,101,521	-		BT2479	0.42	+1.6
3,101,550	-		BT2479	0.44	-1.2
3,101,576	+		BT2479	0.47	-0.0
3,101,576	+		BT2479	0.47	-1.6
3,101,657	+		BT2479	0.54	-0.4
3,101,674	-		BT2479	0.55	-1.0
3,101,691	+		BT2479	0.57	-0.8
3,101,725	+		BT2479	0.60	-0.0
3,101,725	+		BT2479	0.60	-1.6
3,101,725	+		BT2479	0.60	-0.3
3,101,743	+		BT2479	0.61	-1.0
3,101,743	+		BT2479	0.61	-0.0
3,101,747	+		BT2479	0.62	-1.0
3,101,754	-		BT2479	0.62	+1.6
3,101,800	+		BT2479	0.67	-1.2
3,101,801	-		BT2479	0.67	-0.0
3,101,801	-		BT2479	0.67	-1.0
3,101,801	-		BT2479	0.67	-1.0
3,101,820	-		BT2479	0.68	-1.6
3,101,822	+		BT2479	0.69	-0.8
3,101,822	+		BT2479	0.69	+1.6
3,101,822	+		BT2479	0.69	-1.6
3,101,861	+		BT2479	0.72	-0.0
3,101,861	+		BT2479	0.72	-0.6
3,101,862	-		BT2479	0.72	-2.3
3,101,862	-		BT2479	0.72	-2.0
3,101,884	-		BT2479	0.74	-0.8
3,101,947	+		BT2479	0.80	-2.0
3,101,948	-		BT2479	0.80	-1.7
3,102,035	-		BT2479	0.88	-0.0
3,102,047	+		BT2479	0.89	-1.4
3,102,048	-		BT2479	0.89	-0.0
3,102,067	+				-0.8
3,102,087	+				-1.0
3,102,088	-				+1.0
3,102,088	-				-1.6
3,102,176	+				-1.0
3,102,198	+				-2.0
3,102,198	+				-1.1
3,102,215	+				-0.0
3,102,246	+				-1.8
3,102,321	+				-1.6
3,102,321	+				-1.0
3,102,321	+				-0.6
3,102,322	-				-0.0
3,102,334	+				-0.7
3,102,408	+		BT2480	0.14	-0.8
3,102,443	+		BT2480	0.17	-0.8
3,102,543	+		BT2480	0.24	-0.0
3,102,548	-		BT2480	0.24	-0.0
3,102,552	+		BT2480	0.25	-1.2
3,102,553	-		BT2480	0.25	-1.4
3,102,632	+		BT2480	0.30	-1.0
3,102,660	-		BT2480	0.33	-0.6
3,102,669	+		BT2480	0.33	-2.2
3,102,671	+		BT2480	0.33	-1.0
3,102,713	-		BT2480	0.36	-0.0
3,102,720	+		BT2480	0.37	-0.0
3,102,722	+		BT2480	0.37	-1.0
3,102,723	-		BT2480	0.37	+0.6
3,102,726	+		BT2480	0.37	+0.4
3,102,726	+		BT2480	0.37	-0.0
3,102,726	+		BT2480	0.37	-2.3
3,102,727	-		BT2480	0.37	-1.0
3,102,729	-		BT2480	0.38	-1.3
3,102,806	+		BT2480	0.43	-1.5
3,102,820	+		BT2480	0.44	-1.0
3,102,824	+		BT2480	0.44	-0.9
3,103,053	+		BT2480	0.61	-1.5
3,103,087	+		BT2480	0.64	-3.2
3,103,087	+		BT2480	0.64	+0.7
3,103,088	-		BT2480	0.64	-2.0