Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1872

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
2,350,973	-		BT1871	0.55	-0.9
2,351,047	+		BT1871	0.59	-0.0
2,351,047	+		BT1871	0.59	+1.0
2,351,154	+		BT1871	0.64	-0.0
2,351,168	-		BT1871	0.65	-1.6
2,351,168	-		BT1871	0.65	-3.0
2,351,168	-		BT1871	0.65	-1.3
2,351,332	-		BT1871	0.73	-0.3
2,351,367	+		BT1871	0.75	+1.8
2,351,390	+		BT1871	0.76	-1.0
2,351,394	+		BT1871	0.77	-1.0
2,351,506	-		BT1871	0.82	-1.0
2,351,600	+		BT1871	0.87	-0.6
2,351,600	+		BT1871	0.87	-0.0
2,351,601	-		BT1871	0.87	-0.4
2,351,722	+				-0.0
2,351,731	-				-2.0
2,351,821	+				-0.0
2,351,834	+				-2.0
2,351,849	-				-0.4
2,351,875	+				-0.7
2,351,875	+				-1.6
2,351,921	-				-1.0
2,351,941	+				-2.3
2,351,974	-				-1.6
2,351,976	-				-0.0
2,352,107	+				-0.6
2,352,107	+				-0.6
2,352,111	+				-0.8
2,352,111	+				-1.5
2,352,112	-				-2.0
2,352,130	+		BT1872	0.10	-2.8
2,352,130	+		BT1872	0.10	-1.3
2,352,131	-		BT1872	0.10	-0.3
2,352,286	-		BT1872	0.17	-1.5
2,352,365	+		BT1872	0.21	-0.0
2,352,366	-		BT1872	0.21	-0.0
2,352,366	-		BT1872	0.21	-2.5
2,352,484	+		BT1872	0.26	+1.0
2,352,485	-		BT1872	0.26	+0.6
2,352,592	+		BT1872	0.31	-1.0
2,352,788	+		BT1872	0.39	-1.2
2,352,910	-		BT1872	0.45	-2.0
2,352,912	+		BT1872	0.45	-1.6
2,352,912	+		BT1872	0.45	+0.6
2,353,047	+		BT1872	0.51	-1.5
2,353,047	+		BT1872	0.51	-0.4
2,353,069	+		BT1872	0.52	+1.0
2,353,086	+		BT1872	0.52	-1.6
2,353,115	+		BT1872	0.54	-2.0
2,353,399	+		BT1872	0.66	-1.0
2,353,404	+		BT1872	0.66	-1.0
2,353,407	+		BT1872	0.66	-0.7
2,353,408	-		BT1872	0.66	-0.8
2,353,503	+		BT1872	0.71	-0.6
2,353,508	+		BT1872	0.71	-1.0
2,353,535	+		BT1872	0.72	-3.3
2,353,536	-		BT1872	0.72	-3.0
2,353,666	-		BT1872	0.78	-0.3
2,353,834	+		BT1872	0.85	-0.9
2,353,835	-		BT1872	0.85	-3.5
2,353,924	+		BT1872	0.89	-1.1
2,353,962	+				-0.0
2,353,968	+				-0.0
2,354,130	+				-1.0
2,354,217	+				-1.2
2,354,289	+				-3.0
2,354,290	-				-0.0
2,354,291	+				-0.0
2,354,292	-				+1.0
2,354,302	+				-2.0
2,354,330	+				+1.0
2,354,334	+				-0.0
2,354,334	+				-2.6
2,354,335	-				-1.0
2,354,400	+				-2.0
2,354,404	+				+0.1
2,354,405	-				-0.8
2,354,448	+				-1.6
2,354,616	-		BT1873	0.25	+2.0
2,354,621	-		BT1873	0.26	-1.0
2,354,651	-		BT1873	0.29	-0.4
2,354,906	+		BT1873	0.55	-1.7
2,354,946	-		BT1873	0.59	-0.6
2,354,986	+		BT1873	0.63	-1.0
2,354,998	-		BT1873	0.64	-2.3
2,355,018	+		BT1873	0.66	-1.0
2,355,064	+		BT1873	0.71	+0.6
2,355,139	+		BT1873	0.79	-1.0
2,355,153	+		BT1873	0.80	+0.8
2,355,156	+		BT1873	0.80	-1.6