Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1781

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
2,223,975	-		BT1780	0.68	-1.0
2,223,977	+		BT1780	0.68	-1.1
2,223,998	-		BT1780	0.69	-0.0
2,224,021	-		BT1780	0.69	-0.0
2,224,121	+		BT1780	0.73	-0.5
2,224,218	-		BT1780	0.76	-0.9
2,224,220	+		BT1780	0.76	+1.0
2,224,257	+		BT1780	0.78	-1.6
2,224,332	-		BT1780	0.80	-1.0
2,224,397	+		BT1780	0.83	-0.6
2,224,398	-		BT1780	0.83	+0.2
2,224,398	-		BT1780	0.83	-0.8
2,224,528	+		BT1780	0.87	+1.6
2,224,532	+		BT1780	0.87	-0.0
2,224,659	-				-0.0
2,224,819	-				-0.0
2,224,827	+				+1.0
2,224,827	+				+1.0
2,224,828	-				-3.0
2,224,829	+				-1.5
2,224,830	-				-1.7
2,224,910	+				-1.3
2,224,910	+				-0.4
2,224,911	-				-0.8
2,224,928	-				-0.4
2,224,961	-				-2.0
2,225,017	+				-1.2
2,225,018	-				-0.0
2,225,114	+				-0.0
2,225,129	+				-0.9
2,225,129	+				-2.3
2,225,131	+				-0.7
2,225,136	-				-0.0
2,225,237	+		BT1781	0.13	-1.0
2,225,246	-		BT1781	0.13	-0.8
2,225,273	+		BT1781	0.15	-1.0
2,225,345	+		BT1781	0.18	-1.4
2,225,392	+		BT1781	0.20	-1.0
2,225,398	+		BT1781	0.21	-0.8
2,225,459	+		BT1781	0.24	-1.0
2,225,461	+		BT1781	0.24	-1.0
2,225,461	+		BT1781	0.24	-0.5
2,225,506	-		BT1781	0.26	-0.0
2,225,603	+		BT1781	0.31	-0.4
2,225,603	+		BT1781	0.31	-1.2
2,225,603	+		BT1781	0.31	-0.0
2,225,604	-		BT1781	0.31	-1.6
2,225,672	+		BT1781	0.34	-1.8
2,225,673	-		BT1781	0.34	-2.6
2,225,752	+		BT1781	0.38	-0.8
2,225,752	+		BT1781	0.38	-0.6
2,225,752	+		BT1781	0.38	+0.6
2,225,778	+		BT1781	0.39	-0.0
2,225,778	+		BT1781	0.39	-1.8
2,225,779	-		BT1781	0.39	-1.6
2,225,803	+		BT1781	0.41	-0.6
2,225,803	+		BT1781	0.41	-1.0
2,225,803	+		BT1781	0.41	-0.5
2,225,807	+		BT1781	0.41	-0.9
2,225,807	+		BT1781	0.41	-1.0
2,225,807	+		BT1781	0.41	-0.8
2,225,807	+		BT1781	0.41	-1.3
2,225,808	-		BT1781	0.41	-1.4
2,225,853	-		BT1781	0.43	-1.4
2,225,958	-		BT1781	0.48	-2.2
2,226,020	+		BT1781	0.51	-3.0
2,226,028	+		BT1781	0.52	-1.6
2,226,028	+		BT1781	0.52	-0.9
2,226,198	-		BT1781	0.60	-1.2
2,226,243	-		BT1781	0.62	+0.3
2,226,243	-		BT1781	0.62	-1.0
2,226,344	+				-0.0
2,226,344	+		BT1781	0.67	-0.0
2,226,428	+		BT1781	0.71	-0.0
2,226,429	-		BT1781	0.71	-0.0
2,226,517	+		BT1781	0.76	-0.8
2,226,528	+		BT1781	0.76	-0.5
2,226,537	+		BT1781	0.77	-1.6
2,226,590	-		BT1781	0.79	+0.6
2,226,704	+		BT1781	0.85	-0.0
2,226,705	-		BT1781	0.85	-1.6
2,226,724	+		BT1781	0.86	-0.6
2,226,741	-		BT1781	0.87	-1.2
2,226,759	-		BT1781	0.88	+1.0
2,226,795	-		BT1781	0.89	+0.6
2,226,822	-				+2.0
2,226,833	+				-0.8
2,226,834	-				+0.2
2,226,899	+				+0.7
2,226,986	+				-1.0
2,227,062	+				-0.0
2,227,071	-				-1.3
2,227,090	+				-0.8
2,227,090	+				-3.0
2,227,147	+				-0.0
2,227,152	-				-1.0
2,227,221	+				+1.0
2,227,253	+				-1.5
2,227,253	+				-2.0
2,227,276	+				-0.0
2,227,299	+				-0.6
2,227,372	+				-0.8
2,227,377	-				-2.3
2,227,492	+				-0.0
2,227,578	+				-1.6
2,227,579	-				-0.0
2,227,582	-				-0.6
2,227,607	-				-1.2
2,227,720	+				-0.8
2,227,908	+				-1.0
2,227,917	+				-0.6
2,227,947	+				-2.6
2,227,948	-				-1.0