Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1778

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
2,216,743	+		BT1777	0.76	-0.0
2,216,769	-		BT1777	0.77	-1.0
2,216,770	+		BT1777	0.77	-0.9
2,216,771	-		BT1777	0.77	-1.2
2,216,771	-		BT1777	0.77	-2.0
2,216,899	+		BT1777	0.81	-1.0
2,216,955	+		BT1777	0.83	-1.8
2,216,964	-		BT1777	0.84	-1.3
2,217,014	+		BT1777	0.85	-2.0
2,217,062	+		BT1777	0.87	-2.7
2,217,092	+		BT1777	0.88	-0.8
2,217,094	+		BT1777	0.88	-2.3
2,217,240	-				-1.1
2,217,264	+				-0.0
2,217,268	+				-2.6
2,217,296	+				-0.0
2,217,296	+				-1.6
2,217,405	-				-0.7
2,217,405	-				+1.0
2,217,470	+				+1.0
2,217,508	+				-0.6
2,217,596	+				-1.8
2,217,712	-				-1.6
2,217,813	+				-1.0
2,217,813	+				+0.5
2,218,017	+		BT1778	0.13	-0.5
2,218,074	-		BT1778	0.15	+0.6
2,218,140	-		BT1778	0.18	-0.0
2,218,266	+		BT1778	0.23	-0.7
2,218,402	-		BT1778	0.28	-0.0
2,218,562	+		BT1778	0.34	-0.2
2,218,602	+		BT1778	0.36	-1.3
2,218,603	-		BT1778	0.36	-1.0
2,218,678	-		BT1778	0.39	-1.6
2,218,925	+		BT1778	0.49	-2.3
2,218,970	-		BT1778	0.50	-0.0
2,219,138	-		BT1778	0.57	-0.0
2,219,182	-		BT1778	0.59	-0.0
2,219,246	+		BT1778	0.61	-1.4
2,219,280	+		BT1778	0.62	-1.4
2,219,280	+		BT1778	0.62	-1.3
2,219,280	+		BT1778	0.62	-0.6
2,219,282	+		BT1778	0.62	-0.0
2,219,292	-		BT1778	0.63	-1.0
2,219,316	-		BT1778	0.64	-2.0
2,219,316	-		BT1778	0.64	-1.0
2,219,390	+		BT1778	0.67	-1.3
2,219,394	+		BT1778	0.67	-2.6
2,219,523	+		BT1778	0.72	-0.0
2,219,526	-		BT1778	0.72	-1.2
2,219,526	-		BT1778	0.72	-1.0
2,219,691	-		BT1778	0.78	-0.6
2,219,765	+		BT1778	0.81	+1.3
2,219,995	+				-0.0
2,219,995	+				-0.4
2,219,995	+				-0.0
2,220,026	+				-1.6
2,220,026	+				-0.6
2,220,029	+				-1.4
2,220,155	+				+1.0
2,220,158	-				-1.0
2,220,222	+				-0.6
2,220,258	+				-3.4
2,220,273	+				-3.0
2,220,399	+				-1.3
2,220,467	+		BT1779	0.10	-1.4
2,220,623	+		BT1779	0.19	-1.0
2,220,625	+		BT1779	0.19	-0.5
2,220,659	-		BT1779	0.21	-1.1
2,220,703	+		BT1779	0.24	-1.8
2,220,703	+		BT1779	0.24	-1.0
2,220,704	-		BT1779	0.24	-1.0
2,220,707	+		BT1779	0.24	-0.0
2,220,738	+		BT1779	0.26	-0.0
2,220,738	+		BT1779	0.26	-0.8
2,220,739	-		BT1779	0.26	-3.0
2,220,873	+		BT1779	0.34	-0.9
2,220,943	+		BT1779	0.38	-0.2
2,221,002	-		BT1779	0.41	-2.0
2,221,055	+		BT1779	0.44	-0.8
2,221,056	-		BT1779	0.44	-0.0