Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1277

Experiment: b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C)
1,586,257	-		BT1275	0.61	-1.0
1,586,352	-		BT1275	0.68	+1.0
1,586,357	-		BT1275	0.68	-2.1
1,586,399	-		BT1275	0.71	-1.0
1,586,520	+		BT1275	0.80	+1.6
1,586,521	-		BT1275	0.80	-1.4
1,586,764	-				-0.6
1,586,767	-				-1.6
1,586,790	+				-1.3
1,586,791	-				+1.3
1,586,791	-				-0.0
1,586,915	-		BT1276	0.25	-0.0
1,586,950	+		BT1276	0.34	-1.2
1,586,951	-		BT1276	0.34	+1.0
1,586,951	-		BT1276	0.34	+1.0
1,586,951	-		BT1276	0.34	-0.6
1,586,983	+		BT1276	0.42	-0.4
1,586,983	+		BT1276	0.42	-3.4
1,587,006	+		BT1276	0.48	-0.4
1,587,006	+		BT1276	0.48	-0.0
1,587,196	+				-0.0
1,587,200	+				-0.0
1,587,238	+				-1.6
1,587,238	+				-1.0
1,587,239	-				-1.8
1,587,248	-				-0.3
1,587,277	+				-0.0
1,587,289	-				+1.6
1,587,292	+				-1.6
1,587,292	+				-1.0
1,587,293	-				-1.6
1,587,296	-				-1.0
1,587,334	+				-1.2
1,587,484	-		BT1277	0.20	-0.0
1,587,504	-		BT1277	0.21	-1.7
1,587,551	+		BT1277	0.25	-0.7
1,587,572	+		BT1277	0.26	-0.8
1,587,625	+		BT1277	0.30	-2.6
1,587,628	-		BT1277	0.30	-1.4
1,587,655	+		BT1277	0.32	+1.6
1,587,717	+		BT1277	0.37	+0.6
1,587,718	-		BT1277	0.37	-1.6
1,587,740	-		BT1277	0.39	-2.2
1,587,836	+		BT1277	0.46	-0.0
1,587,888	+		BT1277	0.50	+1.0
1,587,889	-		BT1277	0.50	-0.9
1,587,981	+		BT1277	0.57	-2.4
1,587,982	-		BT1277	0.57	-0.0
1,587,999	-		BT1277	0.59	-2.0
1,588,041	-		BT1277	0.62	+1.7
1,588,045	+		BT1277	0.62	-2.0
1,588,045	+		BT1277	0.62	-1.0
1,588,113	-		BT1277	0.67	+1.0
1,588,118	-		BT1277	0.68	-0.8
1,588,159	+		BT1277	0.71	-1.0
1,588,255	+		BT1277	0.78	-1.0
1,588,266	+		BT1277	0.79	+0.3
1,588,268	+		BT1277	0.79	+0.6
1,588,294	+		BT1277	0.81	+0.2
1,588,295	-		BT1277	0.81	-1.3
1,588,426	+				-0.0
1,588,443	+				-1.5
1,588,467	+				-1.0
1,588,467	+				-1.6
1,588,554	+				-0.5
1,588,559	+				-1.0
1,588,604	-				-0.0
1,588,604	-				-1.0
1,588,635	-				+1.0
1,588,635	-				-0.4
1,588,716	-				-1.0
1,588,896	+		BT1278	0.30	+2.3
1,588,932	-		BT1278	0.37	-1.6
1,588,943	-		BT1278	0.39	-2.8
1,588,949	-		BT1278	0.40	-2.6
1,589,047	+		BT1278	0.57	-0.8
1,589,068	+		BT1278	0.61	+2.3
1,589,068	+		BT1278	0.61	-1.2
1,589,082	+		BT1278	0.64	-1.6
1,589,155	+		BT1278	0.77	-0.5
1,589,219	+		BT1278	0.89	-2.3
1,589,219	+		BT1278	0.89	-1.0
1,589,223	+		BT1278	0.89	-0.0
1,589,280	-				+1.0
1,589,306	+				-0.8
1,589,321	+				-2.0
1,589,321	+				-0.8
1,589,330	-				+2.0
1,589,416	+				-0.6