Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2612

Experiment: D-Galactose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose 2.5 mg/ml (C)
3,249,936	-		BT2609	0.82	-0.3
3,250,068	+				-1.8
3,250,089	+				-1.2
3,250,121	-				+0.0
3,250,121	-				-0.6
3,250,143	-				-1.2
3,250,146	-				-1.6
3,250,147	+				-1.0
3,250,161	+				-0.4
3,250,171	+				-1.2
3,250,177	+				+0.0
3,250,185	+				-1.0
3,250,185	+				-1.0
3,250,350	+		BT2610	0.46	-1.8
3,250,350	+		BT2610	0.46	-1.4
3,250,350	+		BT2610	0.46	-1.5
3,250,358	+		BT2610	0.47	+0.0
3,250,362	+		BT2610	0.48	+0.6
3,250,364	+		BT2610	0.49	+1.0
3,250,399	+		BT2610	0.57	-2.0
3,250,476	+		BT2610	0.75	-1.0
3,250,476	+		BT2610	0.75	-0.8
3,250,570	+				-1.3
3,250,575	+				-1.6
3,250,575	+				-1.6
3,250,575	+				-1.9
3,250,575	+				-0.1
3,250,579	+				-1.3
3,250,811	-		BT2611	0.53	-0.6
3,250,903	-				+0.0
3,250,903	-				-1.0
3,251,128	+		BT2612	0.50	+0.0
3,251,128	+		BT2612	0.50	+0.0
3,251,129	-		BT2612	0.50	-1.4
3,251,132	-		BT2612	0.51	+1.0
3,251,183	-		BT2612	0.63	-0.8
3,251,246	-		BT2612	0.78	+0.0
3,251,246	-		BT2612	0.78	-1.0
3,251,315	-				-0.6
3,251,601	+		BT2613	0.15	+0.0
3,251,602	-		BT2613	0.15	-1.0
3,251,635	-		BT2613	0.18	-1.1
3,251,635	-		BT2613	0.18	-1.9
3,251,657	+		BT2613	0.20	-1.0
3,251,684	-		BT2613	0.22	-0.8
3,251,690	-		BT2613	0.23	-1.6
3,251,858	-		BT2613	0.37	-0.3
3,251,870	-		BT2613	0.38	-2.3
3,251,939	-		BT2613	0.44	-1.0
3,252,006	-		BT2613	0.50	+1.0
3,252,006	-		BT2613	0.50	-1.5
3,252,153	-		BT2613	0.63	-2.0
3,252,172	-		BT2613	0.65	+0.0
3,252,271	-		BT2613	0.73	-0.6
3,252,271	-		BT2613	0.73	-0.6
3,252,271	-		BT2613	0.73	+1.0