Experiment: D-Galactose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT4160 and BT4161 are separated by 138 nucleotides BT4161 and BT4162 are separated by 412 nucleotides
BT4160: BT4160 - beta-galactosidase precursor (NCBI ptt file), at 5,466,320 to 5,468,416
BT4160
BT4161: BT4161 - hypothetical protein (NCBI ptt file), at 5,468,555 to 5,469,157
BT4161
BT4162: BT4162 - conserved hypothetical protein (NCBI ptt file), at 5,469,570 to 5,471,648
BT4162
Position (kb) 5468
5469
5470 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5467.583 kb on + strand, within BT4160 at 5467.583 kb on + strand, within BT4160 at 5467.610 kb on + strand, within BT4160 at 5467.620 kb on - strand, within BT4160 at 5467.620 kb on - strand, within BT4160 at 5467.739 kb on + strand, within BT4160 at 5467.740 kb on - strand, within BT4160 at 5467.794 kb on - strand, within BT4160 at 5467.794 kb on - strand, within BT4160 at 5467.795 kb on + strand, within BT4160 at 5467.795 kb on + strand, within BT4160 at 5467.796 kb on - strand, within BT4160 at 5467.807 kb on + strand, within BT4160 at 5467.877 kb on - strand, within BT4160 at 5467.877 kb on - strand, within BT4160 at 5467.877 kb on - strand, within BT4160 at 5467.899 kb on - strand, within BT4160 at 5467.922 kb on + strand, within BT4160 at 5467.922 kb on + strand, within BT4160 at 5467.924 kb on + strand, within BT4160 at 5467.954 kb on - strand, within BT4160 at 5468.095 kb on + strand, within BT4160 at 5468.095 kb on + strand, within BT4160 at 5468.095 kb on + strand, within BT4160 at 5468.096 kb on - strand, within BT4160 at 5468.104 kb on + strand, within BT4160 at 5468.174 kb on + strand, within BT4160 at 5468.200 kb on + strand, within BT4160 at 5468.201 kb on - strand, within BT4160 at 5468.274 kb on + strand at 5468.349 kb on - strand at 5468.350 kb on + strand at 5468.350 kb on + strand at 5468.402 kb on - strand at 5468.475 kb on + strand at 5468.500 kb on - strand at 5468.504 kb on + strand at 5468.519 kb on + strand at 5468.532 kb on - strand at 5468.532 kb on - strand at 5468.573 kb on + strand at 5468.625 kb on + strand, within BT4161 at 5468.654 kb on + strand, within BT4161 at 5468.827 kb on + strand, within BT4161 at 5469.036 kb on - strand, within BT4161 at 5469.144 kb on + strand at 5469.157 kb on + strand at 5469.185 kb on - strand at 5469.216 kb on + strand at 5469.220 kb on - strand at 5469.220 kb on - strand at 5469.228 kb on + strand at 5469.231 kb on + strand at 5469.238 kb on - strand at 5469.260 kb on - strand at 5469.265 kb on - strand at 5469.314 kb on - strand at 5469.339 kb on + strand at 5469.393 kb on - strand at 5469.397 kb on + strand at 5469.439 kb on - strand at 5469.548 kb on - strand at 5469.663 kb on - strand at 5469.752 kb on - strand at 5469.752 kb on - strand at 5469.803 kb on - strand, within BT4162 at 5469.806 kb on + strand, within BT4162 at 5469.806 kb on + strand, within BT4162 at 5469.897 kb on - strand, within BT4162 at 5469.909 kb on - strand, within BT4162 at 5469.938 kb on - strand, within BT4162 at 5469.966 kb on - strand, within BT4162 at 5470.015 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 2.5 mg/ml (C) remove 5,467,583 + BT4160 0.60 -0.0 5,467,583 + BT4160 0.60 -0.3 5,467,610 + BT4160 0.62 -0.0 5,467,620 - BT4160 0.62 -2.0 5,467,620 - BT4160 0.62 +1.0 5,467,739 + BT4160 0.68 -1.4 5,467,740 - BT4160 0.68 -2.0 5,467,794 - BT4160 0.70 -0.8 5,467,794 - BT4160 0.70 -1.2 5,467,795 + BT4160 0.70 -0.0 5,467,795 + BT4160 0.70 -0.8 5,467,796 - BT4160 0.70 -0.8 5,467,807 + BT4160 0.71 -0.4 5,467,877 - BT4160 0.74 -0.3 5,467,877 - BT4160 0.74 -0.9 5,467,877 - BT4160 0.74 -2.2 5,467,899 - BT4160 0.75 -0.0 5,467,922 + BT4160 0.76 -1.0 5,467,922 + BT4160 0.76 -1.0 5,467,924 + BT4160 0.76 -1.1 5,467,954 - BT4160 0.78 +0.6 5,468,095 + BT4160 0.85 -0.4 5,468,095 + BT4160 0.85 -2.6 5,468,095 + BT4160 0.85 -0.0 5,468,096 - BT4160 0.85 -1.1 5,468,104 + BT4160 0.85 -1.1 5,468,174 + BT4160 0.88 -2.2 5,468,200 + BT4160 0.90 -0.0 5,468,201 - BT4160 0.90 -1.6 5,468,274 + -1.0 5,468,349 - -0.2 5,468,350 + +1.0 5,468,350 + -1.5 5,468,402 - +1.0 5,468,475 + +0.4 5,468,500 - -2.6 5,468,504 + -1.6 5,468,519 + -0.6 5,468,532 - -1.1 5,468,532 - -1.6 5,468,573 + -0.6 5,468,625 + BT4161 0.12 +0.4 5,468,654 + BT4161 0.16 +0.2 5,468,827 + BT4161 0.45 +0.7 5,469,036 - BT4161 0.80 -0.5 5,469,144 + -1.6 5,469,157 + -0.0 5,469,185 - -1.6 5,469,216 + -0.8 5,469,220 - -3.5 5,469,220 - -1.0 5,469,228 + -0.6 5,469,231 + -1.6 5,469,238 - +0.2 5,469,260 - -1.0 5,469,265 - -0.0 5,469,314 - -2.0 5,469,339 + -0.7 5,469,393 - -0.9 5,469,397 + -0.0 5,469,439 - -1.6 5,469,548 - -2.2 5,469,663 - -1.6 5,469,752 - -2.0 5,469,752 - -1.4 5,469,803 - BT4162 0.11 -0.4 5,469,806 + BT4162 0.11 -1.6 5,469,806 + BT4162 0.11 -0.0 5,469,897 - BT4162 0.16 -0.6 5,469,909 - BT4162 0.16 -0.9 5,469,938 - BT4162 0.18 -0.7 5,469,966 - BT4162 0.19 -1.0 5,470,015 - -0.7
Or see this region's nucleotide sequence