Experiment: D-Galactose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0516 and BT0517 are separated by 33 nucleotides BT0517 and BT0518 are separated by 183 nucleotides BT0518 and BT0519 are separated by 203 nucleotides BT0519 and BT0520 overlap by 11 nucleotides
BT0516: BT0516 - conserved hypothetical protein (NCBI ptt file), at 639,359 to 639,721
BT0516
BT0517: BT0517 - flavodoxin (NCBI ptt file), at 639,755 to 640,261
BT0517
BT0518: BT0518 - Bifunctional purine biosynthesis protein, putative 5-aminoimidazole-4-carboxamide ribonucleotide(AICAR) transformylase/IMP cyclohydrolase (NCBI ptt file), at 640,445 to 641,620
BT0518
BT0519: BT0519 - hypothetical protein (NCBI ptt file), at 641,824 to 642,528
BT0519
BT0520: BT0520 - transcriptional regulator (NCBI ptt file), at 642,518 to 643,129
BT0520
Position (kb) 640
641
642 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 639.490 kb on + strand, within BT0516 at 639.508 kb on + strand, within BT0516 at 639.509 kb on - strand, within BT0516 at 639.545 kb on - strand, within BT0516 at 639.628 kb on + strand, within BT0516 at 639.629 kb on - strand, within BT0516 at 639.629 kb on - strand, within BT0516 at 639.636 kb on - strand, within BT0516 at 639.667 kb on - strand, within BT0516 at 639.727 kb on - strand at 639.727 kb on - strand at 639.734 kb on + strand at 639.739 kb on + strand at 639.973 kb on + strand, within BT0517 at 639.974 kb on - strand, within BT0517 at 640.014 kb on - strand, within BT0517 at 640.014 kb on - strand, within BT0517 at 640.062 kb on + strand, within BT0517 at 640.184 kb on + strand, within BT0517 at 640.348 kb on - strand at 640.389 kb on + strand at 640.393 kb on + strand at 640.393 kb on + strand at 640.394 kb on - strand at 640.491 kb on + strand at 640.556 kb on + strand at 640.556 kb on + strand at 640.557 kb on - strand at 640.623 kb on - strand, within BT0518 at 640.835 kb on - strand, within BT0518 at 640.971 kb on - strand, within BT0518 at 641.123 kb on + strand, within BT0518 at 641.123 kb on + strand, within BT0518 at 641.123 kb on + strand, within BT0518 at 641.214 kb on - strand, within BT0518 at 641.227 kb on + strand, within BT0518 at 641.290 kb on + strand, within BT0518 at 641.316 kb on + strand, within BT0518 at 641.342 kb on + strand, within BT0518 at 641.468 kb on - strand, within BT0518 at 641.471 kb on + strand, within BT0518 at 641.628 kb on - strand at 641.671 kb on - strand at 641.701 kb on + strand at 641.703 kb on + strand at 641.708 kb on + strand at 641.752 kb on + strand at 641.816 kb on - strand at 641.816 kb on - strand at 641.965 kb on - strand, within BT0519 at 641.973 kb on - strand, within BT0519 at 642.095 kb on - strand, within BT0519 at 642.168 kb on - strand, within BT0519 at 642.217 kb on - strand, within BT0519 at 642.254 kb on - strand, within BT0519 at 642.254 kb on - strand, within BT0519 at 642.371 kb on - strand at 642.423 kb on - strand, within BT0519 at 642.423 kb on - strand, within BT0519 at 642.425 kb on - strand, within BT0519
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 2.5 mg/ml (C) remove 639,490 + BT0516 0.36 -0.3 639,508 + BT0516 0.41 +1.0 639,509 - BT0516 0.41 -0.8 639,545 - BT0516 0.51 -0.0 639,628 + BT0516 0.74 -0.0 639,629 - BT0516 0.74 -0.0 639,629 - BT0516 0.74 -1.6 639,636 - BT0516 0.76 -0.6 639,667 - BT0516 0.85 -1.0 639,727 - +1.0 639,727 - -1.8 639,734 + -0.0 639,739 + -0.9 639,973 + BT0517 0.43 -0.7 639,974 - BT0517 0.43 -0.6 640,014 - BT0517 0.51 -1.0 640,014 - BT0517 0.51 -2.3 640,062 + BT0517 0.61 -1.0 640,184 + BT0517 0.85 -1.6 640,348 - -0.4 640,389 + +1.6 640,393 + -1.7 640,393 + -0.0 640,394 - -0.0 640,491 + -0.8 640,556 + -1.9 640,556 + -0.7 640,557 - -0.0 640,623 - BT0518 0.15 -0.5 640,835 - BT0518 0.33 +0.6 640,971 - BT0518 0.45 -0.0 641,123 + BT0518 0.58 -2.3 641,123 + BT0518 0.58 -1.0 641,123 + BT0518 0.58 -0.0 641,214 - BT0518 0.65 -1.1 641,227 + BT0518 0.66 -1.0 641,290 + BT0518 0.72 +0.6 641,316 + BT0518 0.74 -0.4 641,342 + BT0518 0.76 -0.4 641,468 - BT0518 0.87 +0.1 641,471 + BT0518 0.87 -0.4 641,628 - -0.7 641,671 - -1.6 641,701 + +0.7 641,703 + -0.6 641,708 + +0.4 641,752 + +1.3 641,816 - -1.3 641,816 - -1.0 641,965 - BT0519 0.20 -0.0 641,973 - BT0519 0.21 +0.2 642,095 - BT0519 0.38 -1.6 642,168 - BT0519 0.49 -0.8 642,217 - BT0519 0.56 +0.2 642,254 - BT0519 0.61 -0.0 642,254 - BT0519 0.61 -1.3 642,371 - -0.4 642,423 - BT0519 0.85 -0.0 642,423 - BT0519 0.85 -6.4 642,425 - BT0519 0.85 -1.0
Or see this region's nucleotide sequence