Experiment: D-Galactose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0505 and BT0506 are separated by 178 nucleotides BT0506 and BT0507 are separated by 130 nucleotides BT0507 and BT0508 are separated by 61 nucleotides
BT0505: BT0505 - conserved hypothetical protein (NCBI ptt file), at 626,052 to 626,621
BT0505
BT0506: BT0506 - beta-hexosaminidase precursor (NCBI ptt file), at 626,800 to 629,103
BT0506
BT0507: BT0507 - transcriptional regulator (TetR/AcrR family) (NCBI ptt file), at 629,234 to 629,842
BT0507
BT0508: BT0508 - ABC transporter ATP-binding protein (NCBI ptt file), at 629,904 to 631,733
BT0508
Position (kb) 626
627
628
629
630 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 626.016 kb on + strand at 626.048 kb on + strand at 626.049 kb on - strand at 626.149 kb on + strand, within BT0505 at 626.150 kb on - strand, within BT0505 at 626.235 kb on - strand, within BT0505 at 626.252 kb on + strand, within BT0505 at 626.292 kb on - strand, within BT0505 at 626.298 kb on - strand, within BT0505 at 626.378 kb on - strand, within BT0505 at 626.402 kb on + strand, within BT0505 at 626.447 kb on - strand, within BT0505 at 626.483 kb on + strand, within BT0505 at 626.656 kb on - strand at 626.742 kb on - strand at 626.744 kb on + strand at 626.744 kb on + strand at 626.750 kb on + strand at 626.794 kb on - strand at 626.826 kb on - strand at 626.844 kb on + strand at 626.905 kb on - strand at 627.025 kb on - strand at 627.064 kb on + strand, within BT0506 at 627.065 kb on - strand, within BT0506 at 627.206 kb on + strand, within BT0506 at 627.456 kb on + strand, within BT0506 at 627.548 kb on + strand, within BT0506 at 627.577 kb on + strand, within BT0506 at 627.592 kb on - strand, within BT0506 at 627.610 kb on + strand, within BT0506 at 627.627 kb on + strand, within BT0506 at 627.820 kb on + strand, within BT0506 at 627.824 kb on + strand, within BT0506 at 627.824 kb on + strand, within BT0506 at 628.033 kb on - strand, within BT0506 at 628.068 kb on + strand, within BT0506 at 628.114 kb on + strand, within BT0506 at 628.121 kb on - strand, within BT0506 at 628.161 kb on - strand, within BT0506 at 628.275 kb on - strand, within BT0506 at 628.357 kb on + strand, within BT0506 at 628.524 kb on + strand, within BT0506 at 628.534 kb on - strand, within BT0506 at 628.549 kb on + strand, within BT0506 at 628.587 kb on + strand, within BT0506 at 628.615 kb on - strand, within BT0506 at 628.657 kb on + strand, within BT0506 at 628.658 kb on - strand, within BT0506 at 628.716 kb on + strand, within BT0506 at 628.827 kb on - strand, within BT0506 at 628.959 kb on + strand at 628.961 kb on + strand at 629.046 kb on - strand at 629.135 kb on + strand at 629.136 kb on - strand at 629.139 kb on - strand at 629.140 kb on + strand at 629.140 kb on + strand at 629.141 kb on - strand at 629.164 kb on + strand at 629.172 kb on + strand at 629.308 kb on + strand, within BT0507 at 629.309 kb on - strand, within BT0507 at 629.309 kb on - strand, within BT0507 at 629.350 kb on + strand, within BT0507 at 629.350 kb on + strand, within BT0507 at 629.442 kb on + strand, within BT0507 at 629.442 kb on + strand, within BT0507 at 629.442 kb on + strand, within BT0507 at 629.443 kb on - strand, within BT0507 at 629.443 kb on - strand, within BT0507 at 629.444 kb on + strand, within BT0507 at 629.446 kb on + strand, within BT0507 at 629.447 kb on - strand, within BT0507 at 629.473 kb on - strand, within BT0507 at 629.558 kb on - strand, within BT0507 at 629.629 kb on + strand, within BT0507 at 629.633 kb on - strand, within BT0507 at 629.796 kb on - strand at 629.796 kb on - strand at 629.839 kb on - strand at 629.900 kb on - strand at 630.091 kb on + strand, within BT0508
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 2.5 mg/ml (C) remove 626,016 + -0.0 626,048 + -1.6 626,049 - -0.6 626,149 + BT0505 0.17 -3.1 626,150 - BT0505 0.17 -0.3 626,235 - BT0505 0.32 -0.6 626,252 + BT0505 0.35 -0.6 626,292 - BT0505 0.42 -1.0 626,298 - BT0505 0.43 -1.0 626,378 - BT0505 0.57 -2.4 626,402 + BT0505 0.61 -0.0 626,447 - BT0505 0.69 -1.2 626,483 + BT0505 0.76 -2.0 626,656 - -0.0 626,742 - +0.5 626,744 + -1.0 626,744 + +1.0 626,750 + -0.8 626,794 - -0.0 626,826 - -1.0 626,844 + -2.2 626,905 - -1.0 627,025 - -2.0 627,064 + BT0506 0.11 -0.0 627,065 - BT0506 0.12 -0.6 627,206 + BT0506 0.18 -1.4 627,456 + BT0506 0.28 -0.7 627,548 + BT0506 0.32 -1.0 627,577 + BT0506 0.34 -0.0 627,592 - BT0506 0.34 -2.4 627,610 + BT0506 0.35 -1.0 627,627 + BT0506 0.36 +0.5 627,820 + BT0506 0.44 -0.3 627,824 + BT0506 0.44 -1.0 627,824 + BT0506 0.44 +1.0 628,033 - BT0506 0.54 -1.4 628,068 + BT0506 0.55 +0.4 628,114 + BT0506 0.57 -0.0 628,121 - BT0506 0.57 -2.4 628,161 - BT0506 0.59 -1.0 628,275 - BT0506 0.64 -1.0 628,357 + BT0506 0.68 +1.0 628,524 + BT0506 0.75 -1.2 628,534 - BT0506 0.75 -0.0 628,549 + BT0506 0.76 -2.4 628,587 + BT0506 0.78 -0.0 628,615 - BT0506 0.79 -0.0 628,657 + BT0506 0.81 -0.0 628,658 - BT0506 0.81 -0.0 628,716 + BT0506 0.83 +0.5 628,827 - BT0506 0.88 +0.5 628,959 + +1.5 628,961 + -1.0 629,046 - -1.6 629,135 + -1.0 629,136 - -2.4 629,139 - -1.4 629,140 + -1.0 629,140 + -0.5 629,141 - -1.3 629,164 + -1.6 629,172 + -0.9 629,308 + BT0507 0.12 -0.7 629,309 - BT0507 0.12 -0.4 629,309 - BT0507 0.12 -1.6 629,350 + BT0507 0.19 -0.0 629,350 + BT0507 0.19 -1.5 629,442 + BT0507 0.34 +0.7 629,442 + BT0507 0.34 -0.0 629,442 + BT0507 0.34 -0.5 629,443 - BT0507 0.34 -0.0 629,443 - BT0507 0.34 -1.0 629,444 + BT0507 0.34 -1.8 629,446 + BT0507 0.35 -1.0 629,447 - BT0507 0.35 -0.3 629,473 - BT0507 0.39 -0.0 629,558 - BT0507 0.53 +0.5 629,629 + BT0507 0.65 -1.3 629,633 - BT0507 0.66 +1.0 629,796 - -1.5 629,796 - -1.6 629,839 - -0.8 629,900 - -2.6 630,091 + BT0508 0.10 -1.0
Or see this region's nucleotide sequence