Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1969

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/ml (C)
2,471,280	-				-0.6
2,471,320	-		BT1968	0.14	+1.0
2,471,396	-		BT1968	0.22	+0.6
2,471,474	+		BT1968	0.32	-0.0
2,471,523	-		BT1968	0.37	-2.3
2,471,542	-		BT1968	0.40	+0.4
2,471,584	+		BT1968	0.45	-2.0
2,471,584	+		BT1968	0.45	-1.0
2,471,604	+		BT1968	0.47	-0.3
2,471,604	+		BT1968	0.47	-1.0
2,471,681	+		BT1968	0.56	-0.8
2,471,682	-		BT1968	0.56	-1.6
2,471,695	-		BT1968	0.58	-1.3
2,471,762	-		BT1968	0.66	-0.8
2,471,795	+		BT1968	0.69	-0.0
2,471,914	+		BT1968	0.84	-1.6
2,471,949	-		BT1968	0.88	-0.8
2,471,949	-		BT1968	0.88	-1.2
2,472,014	+				-0.0
2,472,043	-				+1.0
2,472,043	-				-1.0
2,472,043	-				-1.6
2,472,048	-				-1.3
2,472,048	-				+1.0
2,472,049	+				-1.0
2,472,049	+				-0.5
2,472,093	-				-0.0
2,472,300	-				-1.3
2,472,310	+				-2.0
2,472,311	-				-2.0
2,472,327	+				-0.0
2,472,346	+				-0.3
2,472,357	+				-0.4
2,472,357	+				+0.7
2,472,442	+				-1.2
2,472,863	-		BT1969	0.27	-0.0
2,472,863	-		BT1969	0.27	-0.3
2,472,863	-		BT1969	0.27	+1.0
2,472,863	-		BT1969	0.27	+2.0
2,472,888	-		BT1969	0.28	-1.3
2,472,929	+		BT1969	0.30	-0.5
2,472,930	-		BT1969	0.30	+0.4
2,473,043	-		BT1969	0.35	-1.1
2,473,043	-		BT1969	0.35	-1.0
2,473,087	+		BT1969	0.37	+1.0
2,473,153	+		BT1969	0.40	-2.3
2,473,215	+		BT1969	0.42	-0.0
2,473,216	-		BT1969	0.42	-0.6
2,473,282	+		BT1969	0.45	-0.2
2,473,283	-		BT1969	0.45	-0.3
2,473,315	+		BT1969	0.47	-0.0
2,473,316	-		BT1969	0.47	+0.7
2,473,325	-		BT1969	0.47	+1.0
2,473,338	+		BT1969	0.48	-0.5
2,473,338	+		BT1969	0.48	-1.0
2,473,339	-		BT1969	0.48	-0.6
2,473,339	-		BT1969	0.48	-0.8
2,473,391	-		BT1969	0.50	-1.0
2,473,542	+		BT1969	0.57	-0.0
2,473,653	+		BT1969	0.62	-0.0
2,473,657	+		BT1969	0.62	+1.0
2,473,768	-		BT1969	0.67	-1.0
2,473,812	+		BT1969	0.68	-0.2
2,473,945	+		BT1969	0.74	-2.0
2,474,013	+		BT1969	0.77	+0.4
2,474,013	+		BT1969	0.77	-1.6
2,474,028	-		BT1969	0.78	-0.0
2,474,028	-		BT1969	0.78	-0.0
2,474,111	+		BT1969	0.82	-1.1
2,474,156	+		BT1969	0.83	-1.0
2,474,196	+		BT1969	0.85	-2.0
2,474,197	-		BT1969	0.85	-1.8
2,474,197	-		BT1969	0.85	-0.0
2,474,429	+				+0.7
2,474,430	-				-0.6
2,474,681	+				-0.3
2,474,682	-				-1.0
2,474,834	-				-3.6
2,474,889	-				-2.6
2,474,892	-				-2.3
2,474,951	+				-1.8
2,474,975	-				-2.0
2,475,009	-		BT1970	0.10	-3.7
2,475,078	+		BT1970	0.15	-0.0
2,475,079	-		BT1970	0.16	-4.5
2,475,300	-		BT1970	0.32	-3.2
2,475,387	-		BT1970	0.39	-4.3
2,475,406	+		BT1970	0.40	-0.0
2,475,509	-		BT1970	0.48	-1.0
2,475,509	-		BT1970	0.48	-4.8