Experiment: a-Cyclodextrin 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0802 and BT0803 overlap by 16 nucleotides BT0803 and BT0804 are separated by 142 nucleotides
BT0802: BT0802 - arsenical pump-driving ATPase (NCBI ptt file), at 990,629 to 992,341
BT0802
BT0803: BT0803 - integral membrane efflux pump, putative multidrug-efflux transporter (NCBI ptt file), at 992,326 to 993,384
BT0803
BT0804: BT0804 - putative carbon-nitrogen hydrolase (NCBI ptt file), at 993,527 to 995,065
BT0804
Position (kb) 992
993
994 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 991.342 kb on - strand, within BT0802 at 991.342 kb on - strand, within BT0802 at 991.397 kb on - strand at 991.454 kb on + strand, within BT0802 at 991.489 kb on + strand, within BT0802 at 991.500 kb on + strand, within BT0802 at 991.508 kb on - strand, within BT0802 at 991.538 kb on - strand, within BT0802 at 991.668 kb on + strand, within BT0802 at 991.766 kb on - strand, within BT0802 at 991.862 kb on + strand, within BT0802 at 991.863 kb on - strand, within BT0802 at 992.117 kb on - strand, within BT0802 at 992.117 kb on - strand, within BT0802 at 992.597 kb on + strand, within BT0803 at 992.627 kb on - strand, within BT0803 at 992.627 kb on - strand, within BT0803 at 992.627 kb on - strand, within BT0803 at 992.631 kb on - strand, within BT0803 at 992.657 kb on + strand, within BT0803 at 992.688 kb on - strand, within BT0803 at 992.703 kb on - strand, within BT0803 at 992.722 kb on - strand, within BT0803 at 992.732 kb on + strand, within BT0803 at 992.895 kb on - strand, within BT0803 at 993.004 kb on + strand, within BT0803 at 993.027 kb on - strand, within BT0803 at 993.142 kb on + strand, within BT0803 at 993.180 kb on - strand, within BT0803 at 993.312 kb on + strand at 993.347 kb on - strand at 993.454 kb on - strand at 993.478 kb on - strand at 993.553 kb on + strand at 993.588 kb on - strand at 993.669 kb on + strand at 993.672 kb on + strand at 993.672 kb on + strand at 993.776 kb on - strand, within BT0804 at 993.780 kb on - strand, within BT0804 at 993.844 kb on + strand, within BT0804 at 993.899 kb on + strand, within BT0804 at 993.899 kb on + strand, within BT0804 at 993.944 kb on - strand, within BT0804 at 993.980 kb on + strand, within BT0804 at 994.010 kb on - strand, within BT0804 at 994.051 kb on + strand, within BT0804 at 994.185 kb on - strand, within BT0804 at 994.222 kb on - strand, within BT0804
Per-strain Table
Position Strand Gene LocusTag Fraction a-Cyclodextrin 2.5 mg/ml (C) remove 991,342 - BT0802 0.42 -2.0 991,342 - BT0802 0.42 +1.6 991,397 - -1.0 991,454 + BT0802 0.48 +0.0 991,489 + BT0802 0.50 +0.0 991,500 + BT0802 0.51 +0.0 991,508 - BT0802 0.51 -1.0 991,538 - BT0802 0.53 -1.6 991,668 + BT0802 0.61 +0.0 991,766 - BT0802 0.66 -1.0 991,862 + BT0802 0.72 +0.0 991,863 - BT0802 0.72 -2.0 992,117 - BT0802 0.87 -0.7 992,117 - BT0802 0.87 -0.7 992,597 + BT0803 0.26 +1.0 992,627 - BT0803 0.28 -1.2 992,627 - BT0803 0.28 -1.6 992,627 - BT0803 0.28 -0.0 992,631 - BT0803 0.29 -1.6 992,657 + BT0803 0.31 -1.6 992,688 - BT0803 0.34 -2.0 992,703 - BT0803 0.36 -0.0 992,722 - BT0803 0.37 -2.3 992,732 + BT0803 0.38 -3.2 992,895 - BT0803 0.54 -0.0 993,004 + BT0803 0.64 -1.6 993,027 - BT0803 0.66 -1.0 993,142 + BT0803 0.77 -2.0 993,180 - BT0803 0.81 -1.6 993,312 + -0.0 993,347 - -1.3 993,454 - -0.0 993,478 - -0.7 993,553 + -0.0 993,588 - +1.0 993,669 + -3.2 993,672 + -1.0 993,672 + -0.0 993,776 - BT0804 0.16 -1.6 993,780 - BT0804 0.16 -1.6 993,844 + BT0804 0.21 -2.0 993,899 + BT0804 0.24 -2.8 993,899 + BT0804 0.24 -1.0 993,944 - BT0804 0.27 -0.0 993,980 + BT0804 0.29 -0.8 994,010 - BT0804 0.31 +1.0 994,051 + BT0804 0.34 -0.6 994,185 - BT0804 0.43 -0.0 994,222 - BT0804 0.45 +1.6
Or see this region's nucleotide sequence